Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | MBG98_RS00690 | Genome accession | NZ_CP092038 |
| Coordinates | 157043..157735 (+) | Length | 230 a.a. |
| NCBI ID | WP_010945894.1 | Uniprot ID | Q5ZZ78 |
| Organism | Legionella pneumophila strain 11052018-5 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 145134..220543 | 157043..157735 | within | 0 |
Gene organization within MGE regions
Location: 145134..220543
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MBG98_RS00655 (MBG98_00655) | acs | 148249..150132 (-) | 1884 | WP_010945888.1 | acetate--CoA ligase | - |
| MBG98_RS00660 (MBG98_00660) | mmsB | 150134..151030 (-) | 897 | WP_015444947.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| MBG98_RS00665 (MBG98_00665) | - | 151054..152553 (-) | 1500 | WP_015444946.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| MBG98_RS00670 (MBG98_00670) | - | 152664..152840 (-) | 177 | WP_014840774.1 | dodecin domain-containing protein | - |
| MBG98_RS00675 (MBG98_00675) | - | 153018..155486 (+) | 2469 | WP_010945891.1 | hypothetical protein | - |
| MBG98_RS00680 (MBG98_00680) | dapB | 155590..156321 (-) | 732 | WP_010945892.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| MBG98_RS00685 (MBG98_00685) | - | 156501..156686 (-) | 186 | WP_010945893.1 | hypothetical protein | - |
| MBG98_RS00690 (MBG98_00690) | rocC | 157043..157735 (+) | 693 | WP_010945894.1 | ProQ/FinO family protein | Regulator |
| MBG98_RS00695 (MBG98_00695) | - | 157736..158806 (+) | 1071 | WP_010945895.1 | hypothetical protein | - |
| MBG98_RS00700 (MBG98_00700) | sdhB | 158906..164533 (-) | 5628 | WP_010945896.1 | Dot/Icm T4SS effector SdhB | - |
| MBG98_RS00705 (MBG98_00705) | pyk | 164624..166048 (-) | 1425 | WP_010945897.1 | pyruvate kinase | - |
| MBG98_RS00710 (MBG98_00710) | - | 166032..167222 (-) | 1191 | WP_010945898.1 | phosphoglycerate kinase | - |
| MBG98_RS00715 (MBG98_00715) | gap | 167233..168225 (-) | 993 | WP_015444943.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| MBG98_RS00720 (MBG98_00720) | tkt | 168307..170385 (-) | 2079 | WP_010945900.1 | transketolase | - |
| MBG98_RS00725 (MBG98_00725) | - | 170571..171905 (+) | 1335 | WP_010945901.1 | hypothetical protein | - |
| MBG98_RS00730 (MBG98_00730) | - | 172004..174019 (+) | 2016 | WP_015444939.1 | M3 family metallopeptidase | - |
| MBG98_RS00740 (MBG98_00740) | - | 174850..176154 (-) | 1305 | WP_011945340.1 | tetratricopeptide repeat protein | - |
| MBG98_RS00745 (MBG98_00745) | - | 176289..176948 (-) | 660 | WP_011945341.1 | helix-turn-helix domain-containing protein | - |
| MBG98_RS00750 (MBG98_00750) | - | 177119..178003 (+) | 885 | WP_011945342.1 | hypothetical protein | - |
| MBG98_RS00755 (MBG98_00755) | - | 178020..178331 (+) | 312 | WP_011945343.1 | vir region protein | - |
| MBG98_RS00760 (MBG98_00760) | - | 178350..178616 (+) | 267 | WP_011945344.1 | carbon storage regulator | - |
| MBG98_RS00765 (MBG98_00765) | trbB | 178629..179594 (+) | 966 | WP_011945345.1 | P-type conjugative transfer ATPase TrbB | - |
| MBG98_RS00770 (MBG98_00770) | - | 179607..179984 (+) | 378 | WP_011945346.1 | TrbC/VirB2 family protein | - |
| MBG98_RS00775 (MBG98_00775) | - | 179981..180280 (+) | 300 | WP_011945347.1 | conjugal transfer protein TrbD | - |
| MBG98_RS00780 (MBG98_00780) | - | 180277..182814 (+) | 2538 | WP_011945348.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| MBG98_RS00785 (MBG98_00785) | - | 182811..183554 (+) | 744 | WP_011945349.1 | conjugal transfer protein TrbF | - |
| MBG98_RS00790 (MBG98_00790) | trbG | 183551..184426 (+) | 876 | WP_011945350.1 | P-type conjugative transfer protein TrbG | - |
| MBG98_RS00795 (MBG98_00795) | - | 184429..184839 (+) | 411 | WP_011945351.1 | conjugal transfer protein TrbH | - |
| MBG98_RS00800 (MBG98_00800) | - | 184845..186086 (+) | 1242 | WP_011945352.1 | TrbI/VirB10 family protein | - |
| MBG98_RS00805 (MBG98_00805) | trbJ | 186100..186840 (+) | 741 | WP_011945353.1 | P-type conjugative transfer protein TrbJ | - |
| MBG98_RS00810 (MBG98_00810) | - | 186870..187082 (+) | 213 | WP_011945354.1 | hypothetical protein | - |
| MBG98_RS00815 (MBG98_00815) | trbL | 187087..188502 (+) | 1416 | WP_013100980.1 | P-type conjugative transfer protein TrbL | - |
| MBG98_RS00820 (MBG98_00820) | - | 188499..190388 (+) | 1890 | WP_011945356.1 | type IV secretory system conjugative DNA transfer family protein | - |
| MBG98_RS00825 (MBG98_00825) | traF | 190385..190930 (+) | 546 | WP_011945357.1 | conjugative transfer signal peptidase TraF | - |
| MBG98_RS00830 (MBG98_00830) | - | 190927..191091 (+) | 165 | WP_011945358.1 | hypothetical protein | - |
| MBG98_RS00835 (MBG98_00835) | - | 191084..193270 (+) | 2187 | WP_011945359.1 | zincin-like metallopeptidase domain-containing protein | - |
| MBG98_RS00840 (MBG98_00840) | - | 193352..193723 (-) | 372 | WP_011945360.1 | ASCH domain-containing protein | - |
| MBG98_RS00845 (MBG98_00845) | - | 193701..193895 (-) | 195 | WP_238501421.1 | hypothetical protein | - |
| MBG98_RS00850 (MBG98_00850) | - | 193895..195166 (-) | 1272 | WP_042237775.1 | IS256 family transposase | - |
| MBG98_RS00855 (MBG98_00855) | - | 195239..196177 (-) | 939 | WP_238501443.1 | N-acetyltransferase | - |
| MBG98_RS00860 (MBG98_00860) | traI | 196292..198166 (-) | 1875 | WP_011945362.1 | TraI/MobA(P) family conjugative relaxase | - |
| MBG98_RS00865 (MBG98_00865) | traJ | 198163..198516 (-) | 354 | WP_011945363.1 | conjugal transfer transcriptional regulator TraJ | - |
| MBG98_RS00870 (MBG98_00870) | - | 198933..199259 (+) | 327 | WP_013100981.1 | TraK family protein | - |
| MBG98_RS00875 (MBG98_00875) | - | 199259..199984 (+) | 726 | WP_011945364.1 | ArsA-related P-loop ATPase | - |
| MBG98_RS00880 (MBG98_00880) | - | 199984..200439 (+) | 456 | WP_011945365.1 | conjugal transfer protein TraM | - |
| MBG98_RS00885 (MBG98_00885) | - | 200453..201097 (+) | 645 | WP_011945366.1 | hypothetical protein | - |
| MBG98_RS00890 (MBG98_00890) | - | 201141..201602 (-) | 462 | WP_011945367.1 | nucleoside deaminase | - |
| MBG98_RS00895 (MBG98_00895) | - | 201580..203022 (-) | 1443 | WP_011945368.1 | VUT family protein | - |
| MBG98_RS00900 (MBG98_00900) | - | 203015..203374 (-) | 360 | WP_011945369.1 | hypothetical protein | - |
| MBG98_RS00905 (MBG98_00905) | - | 203392..204045 (-) | 654 | WP_011945370.1 | helix-turn-helix domain-containing protein | - |
| MBG98_RS00910 (MBG98_00910) | - | 204183..204422 (+) | 240 | WP_041931991.1 | hypothetical protein | - |
| MBG98_RS00915 (MBG98_00915) | - | 204611..205816 (+) | 1206 | WP_041931961.1 | site-specific integrase | - |
| MBG98_RS00920 (MBG98_00920) | - | 205822..206637 (-) | 816 | WP_011945374.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| MBG98_RS00925 (MBG98_00925) | - | 206634..207425 (-) | 792 | WP_011945375.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| MBG98_RS00930 (MBG98_00930) | - | 207948..208739 (+) | 792 | Protein_182 | IS4-like element ISLpn3 family transposase | - |
| MBG98_RS00935 (MBG98_00935) | - | 208828..210099 (+) | 1272 | WP_042237775.1 | IS256 family transposase | - |
| MBG98_RS00940 (MBG98_00940) | - | 210140..210784 (+) | 645 | Protein_184 | IS4-like element ISLpn3 family transposase | - |
| MBG98_RS00945 (MBG98_00945) | - | 210817..211992 (-) | 1176 | WP_010945905.1 | ISL3 family transposase | - |
| MBG98_RS00950 (MBG98_00950) | - | 212026..212487 (-) | 462 | WP_223804307.1 | site specific recombinase | - |
| MBG98_RS00960 (MBG98_00960) | - | 213799..214128 (+) | 330 | WP_015444936.1 | hypothetical protein | - |
| MBG98_RS00965 (MBG98_00965) | mauJ | 214243..215613 (+) | 1371 | WP_010945909.1 | methylamine utilization protein MauJ | - |
| MBG98_RS00970 (MBG98_00970) | - | 215745..217085 (-) | 1341 | WP_010945910.1 | hypothetical protein | - |
| MBG98_RS00975 (MBG98_00975) | - | 217115..218473 (-) | 1359 | WP_015444935.1 | KAP family P-loop NTPase fold protein | - |
| MBG98_RS00980 (MBG98_00980) | - | 218675..219739 (+) | 1065 | WP_010945912.1 | PIN domain-containing protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25741.65 Da Isoelectric Point: 10.7030
>NTDB_id=655276 MBG98_RS00690 WP_010945894.1 157043..157735(+) (rocC) [Legionella pneumophila strain 11052018-5]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQPSAVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLHGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVNAKAANHSHVNSQPSAVSSVKPMNS
FDSHPEPLLPIYPLRSSTYASQNVAMQSAKSPSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEEKKETTE
Nucleotide
Download Length: 693 bp
>NTDB_id=655276 MBG98_RS00690 WP_010945894.1 157043..157735(+) (rocC) [Legionella pneumophila strain 11052018-5]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATTGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGCCAAGTGCAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTCGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAACAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTCATCAATAAAGCACAAAAAAATCAATCCAAGCGAGCGCGATCTGA
CGCATTATTATGGCTTGCGGCTAATTTCCCTGAGGCATTCGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGATATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGGGAAGCTGTTGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCTTGCCTGAAAGCTCGTGAAGTCCGTATTGATTTGCACGGAAATCCAGTAGCCGA
GGTTACTGAGGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGCGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTGAATGCAAAAGCGGCTAATCATTCGCATGTAAATAGTCAGCCAAGTGCAGTTTCCAGCGTTAAGCCAATGAATTCG
TTTGACTCTCATCCTGAGCCTCTTTTGCCAATATATCCTCTCAGAAGCTCTACCTATGCCTCACAAAATGTGGCAATGCA
ATCCGCCAAGTCACCATCCGTCGTAGTCAAACATAAAGCACCAAAGCAATATGATCCGGATGCTGTAGCCCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGAGAAAAAGGAAACAACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
97.391 |
100 |
0.974 |