Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MA850_RS07595 Genome accession   NZ_CP092034
Coordinates   1472379..1473563 (-) Length   394 a.a.
NCBI ID   WP_238513268.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 15516C     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1467379..1478563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA850_RS07570 (MA850_07570) fliL 1468527..1469063 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  MA850_RS07575 (MA850_07575) acpS 1469063..1469410 (+) 348 WP_002780441.1 holo-ACP synthase -
  MA850_RS07580 (MA850_07580) - 1469411..1469830 (-) 420 WP_002780440.1 hypothetical protein -
  MA850_RS07585 (MA850_07585) - 1469827..1471188 (-) 1362 WP_002868489.1 cytochrome P450 -
  MA850_RS07590 (MA850_07590) - 1471185..1472306 (-) 1122 WP_002858304.1 membrane protein -
  MA850_RS07595 (MA850_07595) kpsS 1472379..1473563 (-) 1185 WP_238513268.1 capsule biosynthesis protein Regulator
  MA850_RS07600 (MA850_07600) kpsC 1473560..1475629 (-) 2070 WP_002878886.1 capsular polysaccharide biosynthesis protein -
  MA850_RS07605 (MA850_07605) cysC 1475626..1476138 (-) 513 WP_002868493.1 cytidine diphosphoramidate kinase -
  MA850_RS07610 (MA850_07610) - 1476128..1476889 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  MA850_RS07615 (MA850_07615) - 1476891..1477493 (-) 603 WP_002859688.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46911.66 Da        Isoelectric Point: 9.9831

>NTDB_id=655268 MA850_RS07595 WP_238513268.1 1472379..1473563(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15516C]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=655268 MA850_RS07595 WP_238513268.1 1472379..1473563(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15516C]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.746

100

0.997