Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG915_RS43270 Genome accession   NZ_CP108165
Coordinates   9759628..9760299 (+) Length   223 a.a.
NCBI ID   WP_326790222.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00151     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 9754628..9765299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG915_RS43255 (OG915_43300) - 9755538..9757430 (+) 1893 WP_326790219.1 BTAD domain-containing putative transcriptional regulator -
  OG915_RS43260 (OG915_43305) - 9758040..9759101 (-) 1062 WP_326790220.1 LuxR C-terminal-related transcriptional regulator -
  OG915_RS43265 (OG915_43310) - 9759200..9759388 (+) 189 WP_326790221.1 hypothetical protein -
  OG915_RS43270 (OG915_43315) dinR/lexA 9759628..9760299 (+) 672 WP_326790222.1 transcriptional repressor LexA Regulator
  OG915_RS43275 (OG915_43320) - 9760475..9760837 (+) 363 WP_326790223.1 DUF1330 domain-containing protein -
  OG915_RS43280 (OG915_43325) - 9760938..9761765 (+) 828 WP_326790224.1 class I SAM-dependent methyltransferase -
  OG915_RS43285 (OG915_43330) - 9762266..9762763 (+) 498 Protein_8559 carbohydrate binding domain-containing protein -
  OG915_RS43290 (OG915_43335) - 9762841..9763632 (-) 792 WP_326790225.1 MBL fold metallo-hydrolase -
  OG915_RS43295 (OG915_43340) - 9763829..9764632 (-) 804 WP_326790226.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 24059.51 Da        Isoelectric Point: 6.3470

>NTDB_id=655267 OG915_RS43270 WP_326790222.1 9759628..9760299(+) (dinR/lexA) [Streptomyces sp. NBC_00151]
MENGTPVRRGRPPGVGTVEGELTARQAAIVRYITESVARQGYPPSMREIGQAVELSSTSSVSHQLGVLEHKGVLYRDPHR
PRAYRVRPSWAPELAARSSKPAEVPLVGRIAAGAPLLADEMVEDVYFLPRQVVGEGELFALTVSGDSMIDAAICDGDIVT
VRKQDSAEHGDIVAALLEDEATVKVLHRKDGQVWLMPRNASFAPIPGDDARILGKVVGVLRVL

Nucleotide


Download         Length: 672 bp        

>NTDB_id=655267 OG915_RS43270 WP_326790222.1 9759628..9760299(+) (dinR/lexA) [Streptomyces sp. NBC_00151]
ATGGAGAACGGCACGCCAGTACGCCGGGGACGACCCCCGGGCGTAGGGACCGTCGAAGGTGAGCTGACGGCCCGCCAGGC
GGCCATCGTCCGCTACATCACCGAGTCCGTCGCCCGGCAGGGCTACCCGCCGTCGATGCGCGAGATCGGCCAGGCCGTGG
AGCTCTCCAGCACCAGCTCGGTCTCCCACCAACTGGGCGTACTGGAACACAAGGGTGTGCTCTACCGCGACCCGCACCGT
CCCCGCGCCTACCGTGTGCGCCCTTCCTGGGCCCCGGAGCTCGCCGCCCGGAGCTCGAAGCCGGCCGAGGTGCCGCTCGT
CGGACGGATCGCGGCCGGCGCGCCGCTGCTCGCCGACGAGATGGTCGAGGACGTCTACTTCCTGCCCCGTCAGGTGGTCG
GGGAGGGGGAGCTGTTCGCCTTGACCGTGTCCGGCGACAGCATGATCGACGCGGCGATCTGCGACGGCGACATCGTGACC
GTCCGCAAGCAGGACAGCGCCGAGCACGGCGACATCGTCGCCGCTCTCCTGGAGGACGAGGCCACCGTCAAGGTCCTGCA
CCGGAAGGACGGACAGGTGTGGCTGATGCCGCGCAACGCGTCCTTCGCCCCGATCCCCGGTGACGACGCGCGCATTCTCG
GCAAGGTGGTCGGCGTTCTGCGCGTGCTCTAG

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(21-83)

Peptidase S24-like (Peptidase_S24)

(105-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

43.415

91.928

0.399