Detailed information NTG0655262

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MA850_RS06370
• Genome accession: NZ_CP092034
• Coordinates: 1222689..1223648 (+)
• Length: 319 a.a.
• NCBI ID: WP_052834007.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 15516C
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1217689..1228648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MA850_RS06345 (MA850_06345)	neuB	1218190..1219230 (+)	1041	WP_042635874.1	N-acetylneuraminate synthase	-
MA850_RS06350 (MA850_06350)	neuC	1219227..1220345 (+)	1119	WP_057044068.1	UDP-N-acetylglucosamine 2-epimerase	-
MA850_RS06355 (MA850_06355)	-	1220342..1221007 (+)	666	WP_058000730.1	acylneuraminate cytidylyltransferase family protein	-
MA850_RS06360 (MA850_06360)	-	1220995..1221816 (+)	822	WP_238513136.1	CatB-related O-acetyltransferase	-
MA850_RS06365 (MA850_06365)	waaV	1221818..1222630 (-)	813	WP_052834006.1	glycosyltransferase family 2 protein	-
MA850_RS06370 (MA850_06370)	waaF	1222689..1223648 (+)	960	WP_052834007.1	lipopolysaccharide heptosyltransferase II	Regulator
MA850_RS06375 (MA850_06375)	gmhA	1223629..1224189 (-)	561	WP_052834008.1	D-sedoheptulose 7-phosphate isomerase	-
MA850_RS06380 (MA850_06380)	rfaE1	1224186..1225571 (-)	1386	WP_052834009.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
MA850_RS06385 (MA850_06385)	rfaD	1225564..1226517 (-)	954	WP_052834010.1	ADP-glyceromanno-heptose 6-epimerase	-
MA850_RS06390 (MA850_06390)	gmhB	1226518..1227078 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
MA850_RS06395 (MA850_06395)	-	1227160..1227462 (+)	303	WP_002852762.1	cytochrome c	-
MA850_RS06400 (MA850_06400)	ccoS	1227485..1227691 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36730.24 Da
• Isoelectric Point: 10.3311

>NTDB_id=655262 MA850_RS06370 WP_052834007.1 1222689..1223648(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15516C]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKIKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKFQNPLVLRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLTCMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=655262 MA850_RS06370 WP_052834007.1 1222689..1223648(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15516C]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAATAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGATAGT
GGTCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAACTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (100-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95