Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   MA850_RS03445 Genome accession   NZ_CP092034
Coordinates   652452..652889 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni strain 15516C     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 647452..657889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA850_RS03425 (MA850_03425) kdpD 647964..649871 (+) 1908 WP_058000820.1 sensor histidine kinase KdpD -
  MA850_RS03430 (MA850_03430) uvrB 649866..651839 (-) 1974 WP_058000821.1 excinuclease ABC subunit UvrB -
  MA850_RS03435 (MA850_03435) - 651993..652223 (+) 231 WP_002852327.1 hypothetical protein -
  MA850_RS03440 (MA850_03440) - 652213..652455 (+) 243 WP_058000822.1 hypothetical protein -
  MA850_RS03445 (MA850_03445) Cj0683 652452..652889 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MA850_RS03450 (MA850_03450) priA 652871..654724 (+) 1854 WP_079751278.1 primosomal protein N' -
  MA850_RS03455 (MA850_03455) cipA 654734..656127 (-) 1394 Protein_672 DUF2972 domain-containing protein -
  MA850_RS03460 (MA850_03460) ispG 656273..657346 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=655257 MA850_RS03445 WP_002852324.1 652452..652889(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15516C]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=655257 MA850_RS03445 WP_002852324.1 652452..652889(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15516C]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAATAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1