Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG915_RS20785 Genome accession   NZ_CP108165
Coordinates   4688195..4689319 (+) Length   374 a.a.
NCBI ID   WP_326786298.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00151     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4683195..4694319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG915_RS20770 (OG915_20790) - 4683712..4684479 (+) 768 WP_326790856.1 hypothetical protein -
  OG915_RS20775 (OG915_20795) - 4684576..4686375 (-) 1800 WP_326786296.1 hypothetical protein -
  OG915_RS20780 (OG915_20800) radA/sms 4686717..4688126 (+) 1410 WP_326786297.1 DNA repair protein RadA Machinery gene
  OG915_RS20785 (OG915_20805) disA 4688195..4689319 (+) 1125 WP_326786298.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG915_RS20790 (OG915_20810) - 4689426..4690259 (-) 834 WP_326786299.1 hypothetical protein -
  OG915_RS20795 (OG915_20815) - 4690452..4691369 (+) 918 WP_326786300.1 A/G-specific adenine glycosylase -
  OG915_RS20800 (OG915_20820) - 4691623..4692162 (+) 540 WP_326786301.1 SigE family RNA polymerase sigma factor -
  OG915_RS20805 (OG915_20825) - 4692150..4692803 (+) 654 WP_326786302.1 hypothetical protein -
  OG915_RS20810 (OG915_20830) cseB 4692823..4693527 (+) 705 WP_326786303.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40041.79 Da        Isoelectric Point: 4.9234

>NTDB_id=655225 OG915_RS20785 WP_326786298.1 4688195..4689319(+) (disA) [Streptomyces sp. NBC_00151]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=655225 OG915_RS20785 WP_326786298.1 4688195..4689319(+) (disA) [Streptomyces sp. NBC_00151]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGTACGGCACTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGTTTTGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGT
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACGATCCCGACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTGTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTCGTCACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAACTGGGCACGGACGGGCGGCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGACCGTGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTGGCCAAGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCTCCGCGCGGGTTCCGTCTCCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCCCGCAGCGTCCGCGAAGGCCTGTCCCGTCTCGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438