Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   MA853_RS07475 Genome accession   NZ_CP092026
Coordinates   1443432..1444616 (-) Length   394 a.a.
NCBI ID   WP_002810446.1    Uniprot ID   -
Organism   Campylobacter coli strain 14240-1     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1438432..1449616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA853_RS07450 (MA853_07450) fliL 1439572..1440108 (+) 537 WP_002779164.1 flagellar basal body-associated protein FliL -
  MA853_RS07455 (MA853_07455) acpS 1440108..1440455 (+) 348 WP_002779165.1 holo-ACP synthase -
  MA853_RS07460 (MA853_07460) - 1440458..1440880 (-) 423 WP_002779166.1 hypothetical protein -
  MA853_RS07465 (MA853_07465) - 1440877..1442247 (-) 1371 WP_002810439.1 cytochrome P450 -
  MA853_RS07470 (MA853_07470) - 1442244..1443365 (-) 1122 WP_238522831.1 DUF829 domain-containing protein -
  MA853_RS07475 (MA853_07475) kpsS 1443432..1444616 (-) 1185 WP_002810446.1 capsule biosynthesis protein Regulator
  MA853_RS07480 (MA853_07480) - 1444613..1446640 (-) 2028 WP_002810448.1 capsular polysaccharide biosynthesis protein -
  MA853_RS07485 (MA853_07485) - 1446713..1448647 (-) 1935 WP_234902140.1 hypothetical protein -

Sequence

Protein


Download         Length: 394 a.a.        Molecular weight: 46711.32 Da        Isoelectric Point: 9.9459

>NTDB_id=655211 MA853_RS07475 WP_002810446.1 1443432..1444616(-) (kpsS) [Campylobacter coli strain 14240-1]
MKFSDKIKKEFSGKNVLLLQGPVGTFFHRLAIKMEKNKTKVLKLNFNGGDFFFYPNGKRCKCDEKDLENFYENFFKEKKI
DAIVMYNDCRLIHAKAIKVARKLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSAFLYWFFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAVLQVYSDTQINHH
YKKSIEEFIEELILSFANHARAKSYLVFKHHPMDRGYRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKRALGCITINS
TVGLSAILESCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPSLVLNFKNYLLNTNQFNGNFYKNSFLSQ

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=655211 MA853_RS07475 WP_002810446.1 1443432..1444616(-) (kpsS) [Campylobacter coli strain 14240-1]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAAATGTCTTGCTTTTACAAGGTCCTGTAGGGACTTTTTT
TCACCGCCTTGCCATAAAGATGGAAAAAAATAAAACCAAAGTTTTAAAGCTTAATTTTAACGGAGGGGATTTTTTTTTCT
ATCCAAACGGAAAAAGGTGCAAGTGCGATGAAAAAGATCTAGAAAATTTCTATGAAAATTTTTTCAAAGAGAAAAAAATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATTCATGCAAAGGCTATTAAAGTGGCTAGGAAACTTGGCATTGGCAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGACGGAGTCAATGCAAACTCTTCTTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGCTTTAAATTT
ATGGCCTTTAGTGCTTTTTTGTATTGGTTTTTTTCTTTTCTACTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTACAGCCTTGAAAAAAAGTATTTTTTAGCTGTTTTGCAAGTTTATAGTGATACACAGATTAACCACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTGT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTGATAAATGAGCTAAGTCAAAAATACCATGTAG
AAGGAAGAATTTTATATGTGCATGATACTTACTTGCCTACTCTTTTAAAAAGGGCTTTAGGTTGTATCACGATTAATTCT
ACAGTGGGTTTAAGCGCTATTTTGGAGAGCTGTCCTACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTAGC
TTATCCTAAAAAGCTCCAATTTTTTTGGCGTGAAGCTCATGCTTACAAACCCAATCCTAGCTTGGTTTTAAATTTCAAAA
ACTATCTTTTAAATACAAATCAATTCAATGGCAATTTTTACAAAAATTCTTTTTTAAGTCAATAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-387)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

86.548

100

0.865