Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG915_RS13645 Genome accession   NZ_CP108165
Coordinates   3082234..3083010 (+) Length   258 a.a.
NCBI ID   WP_081219793.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00151     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3077234..3088010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG915_RS13635 (OG915_13655) - 3078103..3081000 (-) 2898 WP_326785096.1 vitamin B12-dependent ribonucleotide reductase -
  OG915_RS13640 (OG915_13660) nrdR 3081162..3081713 (-) 552 WP_326785097.1 transcriptional regulator NrdR -
  OG915_RS13645 (OG915_13665) dinR/lexA 3082234..3083010 (+) 777 WP_081219793.1 transcriptional repressor LexA Regulator
  OG915_RS13650 (OG915_13670) - 3083144..3085186 (-) 2043 WP_326785098.1 ATP-dependent DNA helicase -
  OG915_RS13655 (OG915_13675) - 3085461..3086312 (-) 852 WP_326785099.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27949.65 Da        Isoelectric Point: 7.4755

>NTDB_id=655207 OG915_RS13645 WP_081219793.1 3082234..3083010(+) (dinR/lexA) [Streptomyces sp. NBC_00151]
MTTTADSATITAQDRSQGRLEPVHAMNEAANHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=655207 OG915_RS13645 WP_081219793.1 3082234..3083010(+) (dinR/lexA) [Streptomyces sp. NBC_00151]
GTGACCACCACCGCAGACAGCGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCGCGAATCATGAGGGGCCAAAGCGCTCCCTGCCTGGCCGACCTCCAGGCATCCGGGCAGACAGCTCGGGACTCA
CGGACCGGCAGCGCCGGGTGATCGAGGTGATCCGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTCGCACACCAGCTGATGGCATTGGAGCGCAAGGGCTTCCTGCGGCG
AGACCCGCACCGCCCGCGCGCGTACGAGGTACGGGGGTCCGACCAGTCGTCGGTGCAGCCGACGGACACGGCGGGCAAGC
CGGCCGCGTCCTACGTTCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTGGAGGACGTT
TTCCCCCTCCCCCGCCAGCTCGTCGGCGACGGGGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTCGCCGCGATGCTGGACG
GCGAAGCCACGGTGAAGCGATTCAAGCGCGAGGACGGACACGTGTGGCTGCTGCCGCACAACTCGGCGTACCAGCCGATC
CCCGGTGACGAGGCGACCATCCTCGGAAAGGTCGTCGCCGTGCTGCGCCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372