Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | MA853_RS05695 | Genome accession | NZ_CP092026 |
| Coordinates | 1091194..1091499 (+) | Length | 101 a.a. |
| NCBI ID | WP_002783353.1 | Uniprot ID | A0A401BKG4 |
| Organism | Campylobacter coli strain 14240-1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1086194..1096499
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MA853_RS05670 (MA853_05670) | rpsR | 1086553..1086813 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| MA853_RS05675 (MA853_05675) | lon | 1086869..1089244 (-) | 2376 | WP_002783351.1 | endopeptidase La | - |
| MA853_RS05680 (MA853_05680) | - | 1089260..1089907 (-) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| MA853_RS05685 (MA853_05685) | fliW | 1090071..1090460 (+) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| MA853_RS05690 (MA853_05690) | proC | 1090460..1091197 (+) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| MA853_RS05695 (MA853_05695) | ctsT | 1091194..1091499 (+) | 306 | WP_002783353.1 | hypothetical protein | Machinery gene |
| MA853_RS05700 (MA853_05700) | - | 1091492..1092160 (+) | 669 | WP_002797569.1 | hypothetical protein | - |
| MA853_RS05705 (MA853_05705) | - | 1092157..1092609 (+) | 453 | WP_002777117.1 | hypothetical protein | - |
| MA853_RS05710 (MA853_05710) | - | 1092602..1093231 (-) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| MA853_RS05715 (MA853_05715) | thiE | 1093209..1093841 (-) | 633 | WP_002783359.1 | thiamine phosphate synthase | - |
| MA853_RS05720 (MA853_05720) | thiD | 1093831..1094643 (-) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| MA853_RS05725 (MA853_05725) | - | 1094643..1095326 (-) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| MA853_RS05730 (MA853_05730) | - | 1095323..1096084 (-) | 762 | WP_072212081.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12395.26 Da Isoelectric Point: 6.4746
>NTDB_id=655201 MA853_RS05695 WP_002783353.1 1091194..1091499(+) (ctsT) [Campylobacter coli strain 14240-1]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=655201 MA853_RS05695 WP_002783353.1 1091194..1091499(+) (ctsT) [Campylobacter coli strain 14240-1]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |