Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MA851_RS07020 Genome accession   NZ_CP092022
Coordinates   1385185..1386369 (-) Length   394 a.a.
NCBI ID   WP_139858407.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 15597A     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1380185..1391369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA851_RS06995 (MA851_06995) fliL 1381333..1381869 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  MA851_RS07000 (MA851_07000) acpS 1381869..1382216 (+) 348 WP_002780441.1 holo-ACP synthase -
  MA851_RS07005 (MA851_07005) - 1382217..1382636 (-) 420 WP_002780440.1 hypothetical protein -
  MA851_RS07010 (MA851_07010) - 1382633..1383994 (-) 1362 WP_032581078.1 cytochrome P450 -
  MA851_RS07015 (MA851_07015) - 1383991..1385112 (-) 1122 WP_002858304.1 membrane protein -
  MA851_RS07020 (MA851_07020) kpsS 1385185..1386369 (-) 1185 WP_139858407.1 capsule polysaccharide modification protein KpsS Regulator
  MA851_RS07025 (MA851_07025) kpsC 1386366..1388435 (-) 2070 WP_002878886.1 capsular polysaccharide biosynthesis protein -
  MA851_RS07030 (MA851_07030) cysC 1388432..1388944 (-) 513 WP_002859687.1 cytidine diphosphoramidate kinase -
  MA851_RS07035 (MA851_07035) - 1388934..1389695 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  MA851_RS07040 (MA851_07040) - 1389697..1390299 (-) 603 WP_002858074.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46850.53 Da        Isoelectric Point: 9.9459

>NTDB_id=655164 MA851_RS07020 WP_139858407.1 1385185..1386369(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15597A]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=655164 MA851_RS07020 WP_139858407.1 1385185..1386369(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15597A]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.492

100

0.995