Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsP   Type   Machinery gene
Locus tag   MA849_RS07365 Genome accession   NZ_CP092020
Coordinates   1455004..1455612 (-) Length   202 a.a.
NCBI ID   WP_002851464.1    Uniprot ID   A0AB36GA54
Organism   Campylobacter jejuni subsp. jejuni strain 14991B     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1450004..1460612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA849_RS07340 (MA849_07340) - 1450161..1450925 (+) 765 WP_052786571.1 TIGR02757 family protein -
  MA849_RS07345 (MA849_07345) - 1450929..1451693 (+) 765 WP_002855821.1 TSUP family transporter -
  MA849_RS07350 (MA849_07350) ctsF 1451686..1452867 (-) 1182 WP_069176619.1 type II secretion system F family protein Machinery gene
  MA849_RS07355 (MA849_07355) ctsE 1452864..1454423 (-) 1560 WP_002864463.1 GspE/PulE family protein Machinery gene
  MA849_RS07360 (MA849_07360) ctsX 1454413..1455000 (-) 588 WP_002851370.1 membrane protein Machinery gene
  MA849_RS07365 (MA849_07365) ctsP 1455004..1455612 (-) 609 WP_002851464.1 ATP-binding protein Machinery gene
  MA849_RS07370 (MA849_07370) ctsD 1455605..1457017 (-) 1413 WP_044260333.1 pilus (MSHA type) biogenesis protein MshL Machinery gene
  MA849_RS07375 (MA849_07375) ctsR 1456995..1457306 (-) 312 WP_002880445.1 hypothetical protein Machinery gene

Sequence

Protein


Download         Length: 202 a.a.        Molecular weight: 23742.78 Da        Isoelectric Point: 9.9955

>NTDB_id=655142 MA849_RS07365 WP_002851464.1 1455004..1455612(-) (ctsP) [Campylobacter jejuni subsp. jejuni strain 14991B]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR

Nucleotide


Download         Length: 609 bp        

>NTDB_id=655142 MA849_RS07365 WP_002851464.1 1455004..1455612(-) (ctsP) [Campylobacter jejuni subsp. jejuni strain 14991B]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsP Campylobacter jejuni subsp. jejuni 81-176

99.505

100

0.995