Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MA849_RS07070 Genome accession   NZ_CP092020
Coordinates   1391080..1392264 (-) Length   394 a.a.
NCBI ID   WP_238505047.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 14991B     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1386080..1397264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA849_RS07045 (MA849_07045) fliL 1387228..1387764 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  MA849_RS07050 (MA849_07050) acpS 1387764..1388111 (+) 348 WP_002780441.1 holo-ACP synthase -
  MA849_RS07055 (MA849_07055) - 1388112..1388531 (-) 420 WP_002780440.1 hypothetical protein -
  MA849_RS07060 (MA849_07060) - 1388528..1389889 (-) 1362 WP_002855307.1 cytochrome P450 -
  MA849_RS07065 (MA849_07065) - 1389886..1391007 (-) 1122 WP_002858304.1 membrane protein -
  MA849_RS07070 (MA849_07070) kpsS 1391080..1392264 (-) 1185 WP_238505047.1 capsule biosynthesis protein Regulator
  MA849_RS07075 (MA849_07075) kpsC 1392261..1394330 (-) 2070 WP_238518829.1 capsular polysaccharide biosynthesis protein -
  MA849_RS07080 (MA849_07080) cysC 1394327..1394839 (-) 513 WP_042963682.1 cytidine diphosphoramidate kinase -
  MA849_RS07085 (MA849_07085) - 1394829..1395590 (-) 762 WP_071450899.1 CTP:phosphoglutamine cytidylyltransferase -
  MA849_RS07090 (MA849_07090) - 1395592..1396194 (-) 603 WP_052776608.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46965.75 Da        Isoelectric Point: 9.9736

>NTDB_id=655138 MA849_RS07070 WP_238505047.1 1391080..1392264(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 14991B]
MRFNTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGKRCKCDEKDLENFYENFFKEKKI
DAIVMYNDCRLIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYFKLINDLSRKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=655138 MA849_RS07070 WP_238505047.1 1391080..1392264(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 14991B]
ATGAGATTTAACACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTCTATGAAAATTTTTTCAAAGAAAAAAAAATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATTCACGCAAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTTTAAACTTATAAATGATTTAAGTCGAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATAATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.97

100

0.98