Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MA848_RS07025 Genome accession   NZ_CP092018
Coordinates   1394268..1395452 (-) Length   394 a.a.
NCBI ID   WP_052858281.1    Uniprot ID   -
Organism   Campylobacter jejuni subsp. jejuni strain 15363C     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1389268..1400452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA848_RS07000 (MA848_07000) fliL 1390416..1390952 (+) 537 WP_002780442.1 flagellar basal body-associated protein FliL -
  MA848_RS07005 (MA848_07005) acpS 1390952..1391299 (+) 348 WP_002780441.1 holo-ACP synthase -
  MA848_RS07010 (MA848_07010) - 1391300..1391719 (-) 420 WP_002780440.1 hypothetical protein -
  MA848_RS07015 (MA848_07015) - 1391716..1393077 (-) 1362 WP_002875992.1 cytochrome P450 -
  MA848_RS07020 (MA848_07020) - 1393074..1394195 (-) 1122 WP_002780436.1 hypothetical protein -
  MA848_RS07025 (MA848_07025) kpsS 1394268..1395452 (-) 1185 WP_052858281.1 capsule polysaccharide modification protein KpsS Regulator
  MA848_RS07030 (MA848_07030) kpsC 1395449..1397518 (-) 2070 WP_220523105.1 capsular polysaccharide biosynthesis protein -
  MA848_RS07035 (MA848_07035) cysC 1397515..1398027 (-) 513 WP_002868493.1 cytidine diphosphoramidate kinase -
  MA848_RS07040 (MA848_07040) - 1398017..1398778 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  MA848_RS07045 (MA848_07045) - 1398780..1399382 (-) 603 WP_002859688.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46838.60 Da        Isoelectric Point: 9.9369

>NTDB_id=655112 MA848_RS07025 WP_052858281.1 1394268..1395452(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15363C]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=655112 MA848_RS07025 WP_052858281.1 1394268..1395452(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain 15363C]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGTGTGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.97

100

0.98