Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MA848_RS06730 Genome accession   NZ_CP092018
Coordinates   1333706..1334674 (+) Length   322 a.a.
NCBI ID   WP_002877332.1    Uniprot ID   A0A5Y3G1G4
Organism   Campylobacter jejuni subsp. jejuni strain 15363C     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1328706..1339674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA848_RS06705 (MA848_06705) cdsA 1329613..1330338 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  MA848_RS06710 (MA848_06710) - 1330347..1330685 (-) 339 WP_002852397.1 hypothetical protein -
  MA848_RS06715 (MA848_06715) - 1330687..1331994 (-) 1308 WP_002871961.1 NFACT family protein -
  MA848_RS06720 (MA848_06720) mobA 1332056..1332631 (+) 576 WP_002877330.1 molybdenum cofactor guanylyltransferase -
  MA848_RS06725 (MA848_06725) pldA 1332628..1333620 (+) 993 WP_002877331.1 phospholipase A -
  MA848_RS06730 (MA848_06730) ceuB 1333706..1334674 (+) 969 WP_002877332.1 ABC transporter permease Machinery gene
  MA848_RS06735 (MA848_06735) ceuC 1334667..1335605 (+) 939 WP_002866771.1 iron chelate uptake ABC transporter family permease subunit -
  MA848_RS06740 (MA848_06740) ceuD 1335602..1336357 (+) 756 WP_002866772.1 ABC transporter ATP-binding protein -
  MA848_RS06745 (MA848_06745) ceuB 1336370..1337362 (+) 993 WP_002866773.1 enterochelin ABC transporter substrate-binding protein CeuB -
  MA848_RS06750 (MA848_06750) - 1337518..1337739 (+) 222 WP_002853781.1 hypothetical protein -
  MA848_RS06755 (MA848_06755) - 1337740..1338021 (+) 282 WP_002866775.1 type II toxin-antitoxin system RelE/ParE family toxin -
  MA848_RS06765 (MA848_06765) - 1338382..1338936 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=655110 MA848_RS06730 WP_002877332.1 1333706..1334674(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 15363C]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILVSLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANIMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=655110 MA848_RS06730 WP_002877332.1 1333706..1334674(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 15363C]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGTATACTTGTTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATATTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGACTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTCATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y3G1G4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991