Detailed information NTG0655106

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MA848_RS05800
• Genome accession: NZ_CP092018
• Coordinates: 1144572..1145531 (+)
• Length: 319 a.a.
• NCBI ID: WP_052834007.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 15363C
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1139572..1150531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MA848_RS05775 (MA848_05775)	neuB	1140073..1141113 (+)	1041	WP_042635874.1	N-acetylneuraminate synthase	-
MA848_RS05780 (MA848_05780)	neuC	1141110..1142228 (+)	1119	WP_057044068.1	UDP-N-acetylglucosamine 2-epimerase	-
MA848_RS05785 (MA848_05785)	-	1142225..1142890 (+)	666	WP_058000730.1	acylneuraminate cytidylyltransferase family protein	-
MA848_RS05790 (MA848_05790)	-	1142878..1143699 (+)	822	WP_238513136.1	CatB-related O-acetyltransferase	-
MA848_RS05795 (MA848_05795)	waaV	1143701..1144513 (-)	813	WP_052834006.1	glycosyltransferase family 2 protein	-
MA848_RS05800 (MA848_05800)	waaF	1144572..1145531 (+)	960	WP_052834007.1	lipopolysaccharide heptosyltransferase II	Regulator
MA848_RS05805 (MA848_05805)	gmhA	1145512..1146072 (-)	561	WP_052834008.1	D-sedoheptulose 7-phosphate isomerase	-
MA848_RS05810 (MA848_05810)	rfaE1	1146069..1147454 (-)	1386	WP_052834009.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
MA848_RS05815 (MA848_05815)	rfaD	1147447..1148400 (-)	954	WP_052834010.1	ADP-glyceromanno-heptose 6-epimerase	-
MA848_RS05820 (MA848_05820)	gmhB	1148401..1148961 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
MA848_RS05825 (MA848_05825)	-	1149043..1149345 (+)	303	WP_002852762.1	cytochrome c	-
MA848_RS05830 (MA848_05830)	ccoS	1149368..1149574 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36730.24 Da
• Isoelectric Point: 10.3311

>NTDB_id=655106 MA848_RS05800 WP_052834007.1 1144572..1145531(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15363C]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKIKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKFQNPLVLRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLTCMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=655106 MA848_RS05800 WP_052834007.1 1144572..1145531(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 15363C]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAATAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGATAGT
GGTCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGCATTTAGATCTAACTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (100-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95