Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   MA848_RS03170 Genome accession   NZ_CP092018
Coordinates   613905..614342 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni strain 15363C     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 608905..619342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA848_RS03150 (MA848_03150) kdpD 609417..611324 (+) 1908 WP_058000820.1 sensor histidine kinase KdpD -
  MA848_RS03155 (MA848_03155) uvrB 611319..613292 (-) 1974 WP_058000821.1 excinuclease ABC subunit UvrB -
  MA848_RS03160 (MA848_03160) - 613446..613676 (+) 231 WP_002852327.1 hypothetical protein -
  MA848_RS03165 (MA848_03165) - 613666..613908 (+) 243 WP_058000822.1 hypothetical protein -
  MA848_RS03170 (MA848_03170) Cj0683 613905..614342 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MA848_RS03175 (MA848_03175) priA 614324..616177 (+) 1854 WP_079751278.1 primosomal protein N' -
  MA848_RS03180 (MA848_03180) cipA 616187..617581 (-) 1395 WP_058000823.1 DUF2972 domain-containing protein -
  MA848_RS03185 (MA848_03185) ispG 617727..618800 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=655101 MA848_RS03170 WP_002852324.1 613905..614342(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15363C]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=655101 MA848_RS03170 WP_002852324.1 613905..614342(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15363C]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTGTCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAATAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1