Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   MA544_RS03630 Genome accession   NZ_CP092017
Coordinates   677418..677855 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni subsp. jejuni strain 15065A     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 672418..682855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MA544_RS03610 (MA544_03610) kdpD 672907..674730 (+) 1824 WP_052786391.1 DUF4118 domain-containing protein -
  MA544_RS03615 (MA544_03615) uvrB 674832..676805 (-) 1974 WP_002867638.1 excinuclease ABC subunit UvrB -
  MA544_RS03620 (MA544_03620) - 676959..677189 (+) 231 WP_002852327.1 hypothetical protein -
  MA544_RS03625 (MA544_03625) - 677179..677421 (+) 243 WP_052786390.1 hypothetical protein -
  MA544_RS03630 (MA544_03630) Cj0683 677418..677855 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MA544_RS03635 (MA544_03635) priA 677837..679690 (+) 1854 WP_079744318.1 primosomal protein N' -
  MA544_RS03640 (MA544_03640) cipA 679700..681094 (-) 1395 WP_002860010.1 DUF2972 domain-containing protein -
  MA544_RS03645 (MA544_03645) ispG 681240..682313 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=655074 MA544_RS03630 WP_002852324.1 677418..677855(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15065A]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=655074 MA544_RS03630 WP_002852324.1 677418..677855(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain 15065A]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1