Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   L8M16_RS18240 Genome accession   NZ_CP091977
Coordinates   3816855..3817241 (+) Length   128 a.a.
NCBI ID   WP_011236794.1    Uniprot ID   -
Organism   Aromatoleum aromaticum strain pCyN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3811855..3822241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L8M16_RS18215 mgtE 3812112..3813554 (+) 1443 WP_168954041.1 magnesium transporter -
  L8M16_RS18220 hemL 3813690..3814973 (-) 1284 WP_168954040.1 glutamate-1-semialdehyde 2,1-aminomutase -
  L8M16_RS18225 thiE 3815021..3815647 (-) 627 WP_168954039.1 thiamine phosphate synthase -
  L8M16_RS18230 - 3815640..3816497 (-) 858 WP_168954038.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  L8M16_RS18235 - 3816633..3816785 (+) 153 WP_197531876.1 rubredoxin -
  L8M16_RS18240 pilG 3816855..3817241 (+) 387 WP_011236794.1 PleD family two-component system response regulator Regulator
  L8M16_RS18245 - 3817265..3817630 (+) 366 WP_011236795.1 PleD family two-component system response regulator -
  L8M16_RS18250 - 3817636..3818151 (+) 516 WP_168954037.1 chemotaxis protein CheW -
  L8M16_RS18255 - 3818203..3820344 (+) 2142 WP_011236797.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14136.35 Da        Isoelectric Point: 7.3231

>NTDB_id=654830 L8M16_RS18240 WP_011236794.1 3816855..3817241(+) (pilG) [Aromatoleum aromaticum strain pCyN1]
MDLTGIRVMVIDDSNTIRRSAEIFLTHSGCEVLLAEDGFDALAKIADHRPHVIFVDIMMPRLDGYQTCALIKKNPRLSAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAAAAHASRTTD

Nucleotide


Download         Length: 387 bp        

>NTDB_id=654830 L8M16_RS18240 WP_011236794.1 3816855..3817241(+) (pilG) [Aromatoleum aromaticum strain pCyN1]
ATGGATCTGACCGGAATCAGGGTGATGGTGATCGACGACAGCAACACCATCCGGCGCAGCGCCGAGATCTTTCTGACCCA
CTCGGGCTGCGAGGTGCTCCTCGCCGAGGACGGCTTCGATGCGCTGGCGAAAATCGCCGACCATCGCCCTCATGTCATTT
TCGTCGACATCATGATGCCGCGTCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACCCGCGGCTTTCGGCGACG
CCGGTGATCATGCTGTCGTCGAAGGACGGGCTATTCGACCGCGCCCGCGGCCGCATGGTCGGCTCGGACGAATATCTCAC
CAAGCCGTTCACGAAGGACAGCCTGCTCAAGGCGGCAGCTGCTCACGCCAGCCGCACCACAGACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.393

95.313

0.633