Detailed information NTG0654829

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: L8M16_RS17295
• Genome accession: NZ_CP091977
• Coordinates: 3610067..3611227 (-)
• Length: 386 a.a.
• NCBI ID: WP_011236605.1
• Uniprot ID: Q5P734
• Organism: Aromatoleum aromaticum strain pCyN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3605067..3616227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L8M16_RS17265	maiA	3605580..3606242 (+)	663	WP_011236600.1	maleylacetoacetate isomerase	-
L8M16_RS17270	-	3606337..3606570 (-)	234	Protein_3394	LysR substrate-binding domain-containing protein	-
L8M16_RS17275	-	3606716..3607315 (-)	600	Protein_3395	LysR family transcriptional regulator	-
L8M16_RS17280	-	3607272..3608468 (+)	1197	WP_011236602.1	YbfB/YjiJ family MFS transporter	-
L8M16_RS17285	ftsX	3608509..3609411 (-)	903	WP_011236603.1	permease-like cell division protein FtsX	-
L8M16_RS17290	-	3609408..3610070 (-)	663	WP_011236604.1	ATP-binding cassette domain-containing protein	-
L8M16_RS17295	pilA	3610067..3611227 (-)	1161	WP_011236605.1	signal recognition particle-docking protein FtsY	Machinery gene
L8M16_RS17300	-	3611368..3612741 (+)	1374	WP_011236606.1	pitrilysin family protein	-
L8M16_RS17305	-	3612743..3614125 (+)	1383	WP_011236607.1	pitrilysin family protein	-
L8M16_RS17310	rsmD	3614122..3614661 (+)	540	WP_011236608.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
L8M16_RS17315	coaD	3614658..3615149 (+)	492	WP_011236609.1	pantetheine-phosphate adenylyltransferase	-
L8M16_RS17320	-	3615164..3615418 (+)	255	WP_041645708.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 41042.93 Da
• Isoelectric Point: 5.2044

>NTDB_id=654829 L8M16_RS17295 WP_011236605.1 3610067..3611227(-) (pilA) [Aromatoleum aromaticum strain pCyN1]
MFGFLRKKPAKPDAVEDKAQPDEIPAAEPALDQAEPVAEAVQPAPPAEVGPDLEASLEAPFETPVPLGAEIAKPGAKRSW
SERLKAGLSRTRQQLGGGLASLFGRRKIDEELLEELEATLLMADCGVEATQHLLGELRKRWKRDRLETADQLQKALADEL
HAILLPLEEPLDVSGHSPYIIMIAGVNGSGKTTSIGKLAKYFQAQGRSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQD
GGDSAAVIFDAINAAKARRIDVVLADTAGRLPTQLHLMDEIAKVKRVIAKASPSGPHEVLLVLDANIGQNALAQVKAFDS
AIGVTGLVVTKLDGTAKGGVVAAIARQYPRPLRFIGVGEGIDDLQPFKAREFVDALFDTNGAGSAA

Nucleotide

• Length: 1161 bp

>NTDB_id=654829 L8M16_RS17295 WP_011236605.1 3610067..3611227(-) (pilA) [Aromatoleum aromaticum strain pCyN1]
ATGTTTGGTTTCCTGAGAAAAAAGCCCGCGAAGCCCGATGCAGTGGAAGACAAGGCGCAGCCGGACGAGATCCCGGCCGC
GGAGCCTGCGCTCGATCAGGCCGAACCGGTCGCCGAAGCGGTGCAGCCGGCACCTCCTGCCGAGGTCGGTCCCGATCTTG
AAGCTTCCCTCGAAGCTCCTTTTGAAACTCCCGTTCCGCTCGGCGCGGAGATCGCGAAGCCGGGCGCGAAACGTTCGTGG
TCCGAGCGGCTCAAGGCGGGACTCAGCCGCACCCGTCAGCAGCTTGGCGGGGGGCTCGCGAGCCTTTTCGGCCGGCGCAA
GATCGACGAGGAACTGCTCGAGGAGCTCGAAGCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCGACGCAGCACCTGC
TCGGCGAACTGCGCAAGCGCTGGAAGCGCGACCGGCTCGAGACTGCCGACCAGCTGCAGAAGGCGCTCGCCGACGAGCTG
CACGCGATCCTGCTGCCGCTCGAGGAACCGCTCGACGTGTCCGGCCACAGCCCCTACATCATCATGATCGCCGGCGTGAA
CGGCTCGGGCAAGACGACTTCGATCGGCAAGCTCGCGAAATATTTCCAGGCGCAGGGCAGGAGCGTGCTGCTCGCCGCCG
GCGACACGTTCCGCGCCGCGGCGCGCGAACAGCTGATGACGTGGGGCGAGCGCAACAACGTCACGGTCATCGCGCAGGAC
GGCGGCGACTCGGCGGCGGTGATCTTCGACGCGATCAACGCGGCCAAGGCACGCCGCATCGATGTCGTGCTCGCCGATAC
TGCGGGCCGGCTGCCGACGCAGCTGCACCTGATGGACGAGATCGCGAAAGTCAAACGGGTCATCGCGAAAGCTTCCCCGA
GCGGGCCGCACGAAGTGCTGCTCGTTCTCGACGCCAACATCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAGC
GCGATCGGCGTCACCGGCCTCGTCGTCACGAAGCTCGACGGCACTGCGAAAGGCGGTGTCGTCGCGGCGATCGCACGCCA
GTACCCGCGGCCGCTGCGCTTCATCGGCGTCGGCGAAGGAATCGACGACCTGCAGCCGTTCAAGGCGCGCGAGTTCGTCG
ACGCGCTGTTCGACACGAATGGAGCCGGCAGCGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (95-160)

3D structure

• AlphaFold DB: Q5P734

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.799	100	0.56