Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT61_RS14355 Genome accession   NZ_CP108143
Coordinates   3334742..3335866 (+) Length   374 a.a.
NCBI ID   WP_329038482.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00178     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3329742..3340866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT61_RS14340 (OHT61_14325) - 3330326..3331168 (+) 843 WP_329038477.1 hypothetical protein -
  OHT61_RS14345 (OHT61_14330) - 3331320..3333062 (-) 1743 WP_329038478.1 hypothetical protein -
  OHT61_RS14350 (OHT61_14335) radA/sms 3333249..3334661 (+) 1413 WP_329038480.1 DNA repair protein RadA Machinery gene
  OHT61_RS14355 (OHT61_14340) disA 3334742..3335866 (+) 1125 WP_329038482.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT61_RS14360 (OHT61_14345) - 3336056..3336868 (-) 813 WP_329043251.1 hypothetical protein -
  OHT61_RS14365 (OHT61_14350) - 3337129..3338031 (+) 903 WP_327117378.1 A/G-specific adenine glycosylase -
  OHT61_RS14370 (OHT61_14355) - 3338210..3338794 (+) 585 WP_329038485.1 SigE family RNA polymerase sigma factor -
  OHT61_RS14375 (OHT61_14360) - 3338791..3339486 (+) 696 WP_329043253.1 hypothetical protein -
  OHT61_RS14380 (OHT61_14365) cseB 3339498..3340205 (+) 708 WP_329038487.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40386.31 Da        Isoelectric Point: 4.9372

>NTDB_id=654808 OHT61_RS14355 WP_329038482.1 3334742..3335866(+) (disA) [Streptomyces sp. NBC_00178]
MAANDRAATPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEAVADLDTLTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGT
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654808 OHT61_RS14355 WP_329038482.1 3334742..3335866(+) (disA) [Streptomyces sp. NBC_00178]
GTGGCAGCCAACGACCGGGCAGCAACGCCCGGAAAGTCCGGCCAAGGCACGGGGAACGAGGCGCTGATGCGCGCCTCCTT
GAGCGCGGTCGCGCCCGGAATGGCCCTTCGTGACGGCCTGGAACGCATCCTGCGCGGCAACACCGGCGGGCTGATCGTTC
TCGGCATGGACAAAACCGTCGAATCCATGTGCACCGGTGGGTTCGTGCTCGACGTGGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTGATCCTCGACAAGGACATGACCAAGATCCTCCGGGCCGGCGTCCAGCTCGTCCC
GGACGCCTCGATCCCGACCGAGGAGACGGGCACCCGCCATCGCACGGCGGACCGCGTCTCCAAGGCCTGCGGGTTCCCCG
TGGTGTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTCTACGTCGACGGGGAGCGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCACTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGGCGCCTCCTGTCGCTCCAGCTGGACGAATTGATCGCG
GGTGTGGAACCGGAGCGGGAGCTGGTCGTGCGCGACTACGTGCCCGAGCCGACCGCGAAGCGGTCCCGCACCGTCGCCGA
GGCGGTGGCCGATCTGGACACCCTGACGCACACCGAGCTGCTCGAACTCCCCGTGGTGGCGAGGGCCCTGGGCTACAGCG
GCTCGCCCGAGACGCTCGACTCGGCGGTCTCCCCGCGCGGCTACCGGCTGCTCGCGAAGGTGCCGCGGCTGCCCGGAACG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGCCTCCAGAAGCTGCTCGCCGCCAGTGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGGGCCCGGAGCGTGCGCGAGGGCCTCTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43