Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG778_RS13895 Genome accession   NZ_CP108137
Coordinates   3218512..3219636 (+) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. NBC_00184     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3213512..3224636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG778_RS13880 (OG778_13885) - 3213883..3214722 (+) 840 WP_328949209.1 hypothetical protein -
  OG778_RS13885 (OG778_13890) - 3214814..3216790 (-) 1977 WP_328949210.1 hypothetical protein -
  OG778_RS13890 (OG778_13895) radA/sms 3216975..3218387 (+) 1413 WP_219572035.1 DNA repair protein RadA Machinery gene
  OG778_RS13895 (OG778_13900) disA 3218512..3219636 (+) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG778_RS13900 (OG778_13905) - 3219758..3220582 (-) 825 WP_328949211.1 hypothetical protein -
  OG778_RS13905 (OG778_13910) - 3220921..3221823 (+) 903 WP_219575455.1 A/G-specific adenine glycosylase -
  OG778_RS13910 (OG778_13915) - 3222029..3222673 (+) 645 WP_219572036.1 SigE family RNA polymerase sigma factor -
  OG778_RS13915 (OG778_13920) - 3222796..3223437 (+) 642 WP_328951765.1 hypothetical protein -
  OG778_RS13920 (OG778_13925) cseB 3223448..3224152 (+) 705 WP_219572037.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=654734 OG778_RS13895 WP_114245192.1 3218512..3219636(+) (disA) [Streptomyces sp. NBC_00184]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654734 OG778_RS13895 WP_114245192.1 3218512..3219636(+) (disA) [Streptomyces sp. NBC_00184]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAGGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTCGCCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGCGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGTACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCCCAGCGTCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACCGACGGCCGACTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTACGTGCCGGAGCCGACCGCGAAGCGTTCACGCACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGTCCCACACCGAGCTGCTGGAACTCCCGGTCGTGGCAAGGGCGCTGGGCTACAGCG
GCTCCCCCGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGGGCACGCAGCGTGCGCGAGGGCCTGTCGCGACTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436