Detailed information NTG0065443

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BSEPE_RS05795
• Genome accession: NZ_AP013042
• Coordinates: 1101657..1102604 (+)
• Length: 315 a.a.
• NCBI ID: WP_066045041.1
• Uniprot ID: A0A0P0US62
• Organism: Endosymbiont of Bathymodiolus septemdierum str. Myojin knoll isolate A1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1096657..1107604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSEPE_RS05770 (AXH84_RS05780)	-	1096994..1097353 (-)	360	WP_066045033.1	gamma-glutamylcyclotransferase family protein	-
BSEPE_RS05775 (AXH84_RS05785)	-	1097368..1098651 (-)	1284	WP_066045035.1	pitrilysin family protein	-
BSEPE_RS05780 (AXH84_RS05790)	-	1098648..1099964 (-)	1317	WP_066045037.1	pitrilysin family protein	-
BSEPE_RS05785 (AXH84_RS05795)	-	1099949..1100524 (-)	576	WP_070104567.1	sulfite oxidase heme-binding subunit YedZ	-
BSEPE_RS05790 (AXH84_RS05800)	msrP	1100521..1101474 (-)	954	WP_066045039.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	-
BSEPE_RS05795 (AXH84_RS05805)	pilA	1101657..1102604 (+)	948	WP_066045041.1	signal recognition particle-docking protein FtsY	Machinery gene
BSEPE_RS05800 (AXH84_RS05810)	-	1102634..1103761 (+)	1128	WP_066045043.1	hypothetical protein	-
BSEPE_RS05805 (AXH84_RS05815)	-	1103816..1104319 (+)	504	WP_066045045.1	thioredoxin fold domain-containing protein	-
BSEPE_RS05810 (AXH84_RS05820)	-	1104367..1105581 (+)	1215	WP_162262090.1	TolC family protein	-
BSEPE_RS05815 (AXH84_RS05825)	-	1105578..1106054 (+)	477	WP_066045049.1	efflux RND transporter periplasmic adaptor subunit	-
BSEPE_RS05820 (AXH84_RS05830)	-	1106057..1106686 (-)	630	WP_066045052.1	hypothetical protein	-

Sequence

Protein

• Length: 315 a.a.
• Molecular weight: 34418.36 Da
• Isoelectric Point: 5.2992

>NTDB_id=65443 BSEPE_RS05795 WP_066045041.1 1101657..1102604(+) (pilA) [Endosymbiont of Bathymodiolus septemdierum str. Myojin knoll isolate A1]
MFNFFKKNTTDKEKATSLKDKLEKSRRKLGSGLFNLLLGKKNIDDDLLEELEMLLITADIGIDTTDKVLESVRKNASRKT
LKNSDELYEFLKGELAKLLIEDNQLNTDQQDTFVILVVGVNGAGKTTTIGKLAKSFQNQGKSVMLAAGDTFRAAAVEQLK
VWGQRNDIPVVAQDTGADAASVIFDAYQSAQAKKIDILIADTAGRLHTQDNLMQELEKIKRVISKQNEDAPHEVMLVVDG
GAGQNALNQAKAFNKSVILSGISVTKLDGTAKGGIVFAISNELQLPIRYIGVGEGIDDLKPFVAKDFVDALFETQ

Nucleotide

• Length: 948 bp

>NTDB_id=65443 BSEPE_RS05795 WP_066045041.1 1101657..1102604(+) (pilA) [Endosymbiont of Bathymodiolus septemdierum str. Myojin knoll isolate A1]
ATGTTTAATTTTTTCAAAAAAAACACTACTGACAAAGAAAAGGCAACTTCATTAAAAGATAAATTGGAAAAATCTAGGCG
AAAACTAGGCTCTGGATTATTCAATTTGTTATTGGGTAAAAAAAACATCGATGATGATTTACTAGAAGAGCTTGAAATGT
TGTTAATTACTGCCGATATTGGCATTGATACTACAGACAAAGTGTTGGAATCTGTGCGTAAAAATGCGTCACGCAAAACA
CTCAAAAATTCTGATGAATTATATGAATTTTTAAAAGGTGAATTGGCAAAATTATTAATTGAAGACAATCAACTTAACAC
CGACCAACAAGATACCTTCGTGATTTTAGTCGTTGGTGTAAACGGCGCAGGTAAAACCACAACCATTGGCAAGTTGGCAA
AATCTTTCCAAAATCAAGGAAAATCAGTCATGCTAGCTGCTGGCGATACTTTCCGTGCCGCTGCCGTTGAGCAACTTAAA
GTATGGGGTCAGCGTAATGATATACCAGTCGTTGCTCAAGATACTGGTGCAGACGCAGCCTCGGTAATTTTTGATGCTTA
TCAATCCGCACAAGCTAAAAAGATTGACATTCTGATTGCCGACACCGCAGGACGCTTGCATACGCAAGATAATTTAATGC
AAGAATTGGAAAAAATCAAACGCGTTATTAGCAAACAAAACGAAGATGCTCCACATGAAGTGATGCTAGTAGTCGACGGC
GGCGCAGGTCAAAATGCACTTAATCAAGCCAAAGCATTTAACAAATCCGTGATACTTAGTGGTATTAGCGTTACCAAACT
TGATGGCACTGCCAAAGGGGGTATCGTCTTTGCGATTTCTAATGAATTGCAATTACCGATTCGCTATATTGGTGTCGGCG
AAGGTATTGATGACCTTAAGCCATTTGTTGCCAAGGACTTTGTTGACGCCTTATTTGAGACGCAATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (31-95)

• SRP54-type protein, GTPase domain (SRP54) (113-312)

3D structure

• AlphaFold DB: A0A0P0US62

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.226	98.413	0.524