Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L8956_RS06480 Genome accession   NZ_CP091882
Coordinates   1353822..1354004 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain JHS1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348822..1359004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L8956_RS06465 (L8956_06465) - 1351456..1351647 (-) 192 WP_034314532.1 YjzD family protein -
  L8956_RS06470 (L8956_06470) - 1351942..1352664 (+) 723 WP_057275858.1 alpha/beta hydrolase -
  L8956_RS06475 (L8956_06475) - 1352767..1353600 (+) 834 WP_057275859.1 hypothetical protein -
  L8956_RS06480 (L8956_06480) comZ 1353822..1354004 (+) 183 WP_034314525.1 ComZ family protein Regulator
  L8956_RS06485 (L8956_06485) - 1354045..1354266 (-) 222 WP_057275860.1 hypothetical protein -
  L8956_RS06490 (L8956_06490) - 1354469..1355404 (+) 936 WP_034314519.1 beta-ketoacyl-ACP synthase III -
  L8956_RS06495 (L8956_06495) fabF 1355456..1356694 (+) 1239 WP_057275861.1 beta-ketoacyl-ACP synthase II -
  L8956_RS06500 (L8956_06500) - 1356822..1357586 (+) 765 WP_239860541.1 DUF2268 domain-containing putative Zn-dependent protease -
  L8956_RS06505 (L8956_06505) - 1357701..1358456 (+) 756 WP_034314514.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=654221 L8956_RS06480 WP_034314525.1 1353822..1354004(+) (comZ) [Peribacillus frigoritolerans strain JHS1]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=654221 L8956_RS06480 WP_034314525.1 1353822..1354004(+) (comZ) [Peribacillus frigoritolerans strain JHS1]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633