Detailed information NTG0065420

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R12_RS23230
• Genome accession: NZ_AP022044
• Coordinates: 4780304..4781329 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP4-S17-ESBL-03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4775304..4786329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R12_RS23210 (WP4S17E03_44960)	metJ	4776489..4776806 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R12_RS23215 (WP4S17E03_44970)	yiiX	4776866..4777474 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
H7R12_RS23220 (WP4S17E03_44980)	rpmE	4777535..4777747 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R12_RS23225 (WP4S17E03_44990)	priA	4777950..4780148 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
H7R12_RS23230 (WP4S17E03_45000)	cytR	4780304..4781329 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R12_RS23235 (WP4S17E03_45010)	ftsN	4781421..4782380 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R12_RS23240 (WP4S17E03_45020)	hslV	4782473..4783003 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R12_RS23245 (WP4S17E03_45030)	hslU	4783013..4784344 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R12_RS23250 (WP4S17E03_45040)	menA	4784411..4785337 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R12_RS23255 (WP4S17E03_45050)	rraA	4785430..4785915 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R12_RS23260 (WP4S17E03_45060)	zapB	4786000..4786245 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=65420 H7R12_RS23230 WP_000644908.1 4780304..4781329(+) (cytR) [Escherichia coli strain WP4-S17-ESBL-03]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65420 H7R12_RS23230 WP_000644908.1 4780304..4781329(+) (cytR) [Escherichia coli strain WP4-S17-ESBL-03]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625