Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG729_RS17415 Genome accession   NZ_CP108120
Coordinates   3841515..3842639 (+) Length   374 a.a.
NCBI ID   WP_360871416.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00210     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3836515..3847639
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG729_RS17400 (OG729_17385) - 3837250..3838083 (+) 834 WP_405806951.1 hypothetical protein -
  OG729_RS17405 (OG729_17390) - 3838101..3839786 (-) 1686 WP_405806952.1 BACON domain-containing protein -
  OG729_RS17410 (OG729_17395) radA/sms 3840016..3841470 (+) 1455 WP_405806953.1 DNA repair protein RadA Machinery gene
  OG729_RS17415 (OG729_17400) disA 3841515..3842639 (+) 1125 WP_360871416.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG729_RS17420 (OG729_17405) - 3842712..3843518 (-) 807 WP_405806955.1 hypothetical protein -
  OG729_RS17425 (OG729_17410) - 3843866..3844792 (+) 927 WP_405806957.1 A/G-specific adenine glycosylase -
  OG729_RS17430 (OG729_17415) - 3845001..3845606 (+) 606 WP_360871407.1 SigE family RNA polymerase sigma factor -
  OG729_RS17435 (OG729_17420) - 3845594..3846256 (+) 663 WP_405806959.1 hypothetical protein -
  OG729_RS17440 (OG729_17425) cseB 3846267..3846971 (+) 705 WP_405806960.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40206.02 Da        Isoelectric Point: 4.9451

>NTDB_id=654178 OG729_RS17415 WP_360871416.1 3841515..3842639(+) (disA) [Streptomyces sp. NBC_00210]
MAAKDGASAPGKSGGGSGNEALIRAALSAVAPGTALRDGLERILRGNTGGLLVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDIGKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALTELNDLTHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654178 OG729_RS17415 WP_360871416.1 3841515..3842639(+) (disA) [Streptomyces sp. NBC_00210]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCGCTGATCCGCGCCGCCCT
GAGCGCGGTCGCTCCCGGCACCGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGCAACACCGGAGGCCTTCTCGTCC
TCGGTATGGACAAAACGGTTGAATCCATGTGTACCGGCGGTTTTGTGCTGGATGTGGAATTCACCGCGACCCGGCTGCGC
GAACTGTGCAAACTCGACGGCGCACTCATCCTCGACAAGGACATCGGCAAGATCCACCGGGCCGGTGTACAGCTGGTTCC
GGACGCCTCCATCCCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGGGTCTCCCGGCAGTGCGGCTTCCCGG
TCGTCTCCGTGTCGCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGGGAGCGCCGGGTCCTCGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCGCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGATCTGGTGACGGTCCGGGACGTCACGGCCGTGGCGCAGCGCCTGGAGATGGTGCGCCGGATCG
CCACGGAGATCGCCGAGTATGTGGTGGAGTTGGGCACCGACGGCCGCCTTCTGGCGCTTCAGCTGGACGAATTGATCGCG
GGCGTGGAACCCGAGCGCGAACTGGTCGTACGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGCACGGTCGACGA
GGCGCTCACCGAGCTGAACGACCTCACGCACGCCGAGCTTCTCGAACTGCCCATAGTGGCAAGGGCATTGGGGTACAGCG
GCTCTCCGGAAACGCTGGACTCGGCGGTCTCGCCGCGGGGTTACCGGCTGCTGGCGAAGGTGCCGCGACTGCCCGGCGCG
ATCATCGAGCGGCTTGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGATCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGCCTGTCGCGTCTCGCTGAGTCCTCGATCCTCGAACGCTACG
TGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438