Detailed information NTG0654119

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG820_RS24985
• Genome accession: NZ_CP108118
• Coordinates: 5394587..5395630 (+)
• Length: 347 a.a.
• NCBI ID: WP_328762841.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00211
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5389587..5400630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG820_RS24960 (OG820_24910)	-	5390351..5391028 (+)	678	WP_327283558.1	NAD(P)-binding domain-containing protein	-
OG820_RS24965 (OG820_24915)	-	5391288..5392139 (-)	852	WP_406387590.1	hypothetical protein	-
OG820_RS24970 (OG820_24920)	-	5392413..5392916 (-)	504	WP_327283556.1	MarR family transcriptional regulator	-
OG820_RS24975 (OG820_24925)	-	5393033..5393854 (+)	822	WP_327283555.1	NAD(P)H-binding protein	-
OG820_RS24980 (OG820_24930)	-	5393893..5394510 (+)	618	WP_327283554.1	hypothetical protein	-
OG820_RS24985 (OG820_24935)	cytR	5394587..5395630 (+)	1044	WP_328762841.1	LacI family DNA-binding transcriptional regulator	Regulator
OG820_RS24995 (OG820_24945)	orn	5395895..5396497 (-)	603	WP_327283552.1	oligoribonuclease	-
OG820_RS25000 (OG820_24950)	-	5396590..5397762 (-)	1173	WP_327283551.1	helix-turn-helix domain-containing protein	-
OG820_RS25005 (OG820_24955)	-	5398133..5398612 (-)	480	WP_327283550.1	hypothetical protein	-
OG820_RS25010 (OG820_24960)	-	5398968..5399498 (+)	531	WP_327283549.1	universal stress protein	-
OG820_RS25015 (OG820_24965)	-	5399598..5400167 (+)	570	WP_327283548.1	GPR1/FUN34/YaaH family transporter	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 36415.19 Da
• Isoelectric Point: 5.7324

>NTDB_id=654119 OG820_RS24985 WP_328762841.1 5394587..5395630(+) (cytR) [Streptomyces sp. NBC_00211]
MNGHGRSGGRPTLEEVAARAGVGRGTVSRVINGSSKVSERTRAAVEAAVAELGYVPNRAARALAANRADAVALVVPEPQS
RFFTEPYFSDVVRGVGAALAETDVQLVLTLAGNDRERRRIAQYLSAHRVDGVLLVAVHADDPLPELLAELGIPAVISGRR
SAAETLPSVDCDNLAGAAEAVRHLLGRGRRAIATVTGPLDVYGAQCRLDGYREALTAAGVPADELLIADGDFTEEGGRRA
VRELLERRPDLDAVFAASDVMAAGARHELRAAGRRIPEDVALVGFDDSVLARHMDPPLTSVRQPVEEMGRTMARVLLARI
AGQSGGAGDPGGAAVVLPTELVVRESS

Nucleotide

• Length: 1044 bp

>NTDB_id=654119 OG820_RS24985 WP_328762841.1 5394587..5395630(+) (cytR) [Streptomyces sp. NBC_00211]
ATGAACGGGCATGGGCGCAGTGGGGGACGGCCGACGCTGGAAGAGGTCGCGGCGCGCGCCGGAGTGGGGCGTGGCACGGT
CTCCCGGGTGATCAACGGATCCTCCAAGGTCAGCGAGCGCACCAGGGCCGCCGTTGAGGCCGCCGTCGCGGAACTCGGGT
ACGTCCCGAACCGGGCCGCCCGGGCCCTGGCCGCCAACCGGGCCGACGCCGTCGCCCTGGTCGTTCCCGAGCCCCAGTCC
CGCTTCTTCACCGAGCCGTACTTCTCCGATGTGGTCCGCGGGGTCGGCGCCGCCCTCGCCGAAACCGACGTCCAGCTGGT
CCTCACCCTCGCCGGCAACGACCGCGAGCGCCGCCGGATCGCCCAGTACCTGTCCGCGCACCGCGTCGACGGGGTGCTGC
TCGTCGCCGTCCACGCCGACGACCCGCTGCCCGAGCTGCTGGCCGAGCTCGGCATTCCGGCGGTGATCAGTGGCCGCCGC
TCGGCCGCCGAGACGCTGCCGTCCGTGGACTGCGACAACCTGGCGGGTGCTGCCGAGGCGGTACGCCACCTCCTCGGCCG
GGGCCGGCGCGCGATAGCCACCGTCACGGGACCGCTGGACGTGTACGGCGCGCAGTGCAGGCTCGACGGCTACCGGGAGG
CCCTGACGGCTGCGGGGGTCCCCGCCGACGAGCTGCTGATCGCGGACGGTGATTTCACGGAGGAGGGCGGTCGGCGGGCC
GTGCGGGAGCTGCTGGAGCGTCGCCCCGACCTCGACGCCGTCTTCGCCGCTTCCGACGTGATGGCGGCGGGCGCCCGCCA
CGAGCTGCGTGCGGCCGGCCGCCGGATACCCGAGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGCTGGCCCGGCACA
TGGATCCGCCGCTGACGAGCGTGCGCCAACCGGTCGAGGAGATGGGCCGGACCATGGCGCGCGTACTGCTGGCGCGGATC
GCCGGGCAGTCAGGCGGGGCGGGGGATCCCGGGGGCGCGGCCGTGGTGCTGCCGACCGAGCTGGTGGTGCGGGAGTCCTC
GTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-347)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.135	98.559	0.366