Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA17_RS17360 Genome accession   NZ_CP108115
Coordinates   3820381..3821505 (+) Length   374 a.a.
NCBI ID   WP_406507375.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00212     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3815381..3826505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA17_RS17345 (OHA17_17280) - 3816096..3816911 (+) 816 WP_398877729.1 hypothetical protein -
  OHA17_RS17350 (OHA17_17285) - 3816936..3818600 (-) 1665 WP_406507373.1 BACON domain-containing protein -
  OHA17_RS17355 (OHA17_17290) radA/sms 3818893..3820290 (+) 1398 WP_406507374.1 DNA repair protein RadA Machinery gene
  OHA17_RS17360 (OHA17_17295) disA 3820381..3821505 (+) 1125 WP_406507375.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA17_RS17365 (OHA17_17300) - 3822121..3822945 (-) 825 WP_406507376.1 hypothetical protein -
  OHA17_RS17370 (OHA17_17305) - 3823111..3823737 (+) 627 WP_406507377.1 phosphatase PAP2 family protein -
  OHA17_RS17375 (OHA17_17310) - 3823826..3824740 (+) 915 WP_406510743.1 A/G-specific adenine glycosylase -
  OHA17_RS17380 (OHA17_17315) - 3824992..3825549 (+) 558 WP_053729102.1 SigE family RNA polymerase sigma factor -
  OHA17_RS17385 (OHA17_17320) - 3825537..3826208 (+) 672 WP_406507378.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40337.17 Da        Isoelectric Point: 5.0197

>NTDB_id=654011 OHA17_RS17360 WP_406507375.1 3820381..3821505(+) (disA) [Streptomyces sp. NBC_00212]
MAANDRASAPGKSGTGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDAGIPTEETGTRHRTADRVSKQCNFPVVSVSQSMCLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALRELNDLTHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654011 OHA17_RS17360 WP_406507375.1 3820381..3821505(+) (disA) [Streptomyces sp. NBC_00212]
GTGGCAGCCAACGACCGGGCATCAGCACCCGGAAAGTCCGGCACAGGCTCCGGTAACGAAGCACTGATGCGCGCCGCGCT
GAGCGCCGTCGCGCCCGGCACCGCGCTCCGCGACGGCCTGGAGCGCATCCTGCGCGGCAACACGGGCGGTCTGATCGTGC
TCGGCCTCGACAAGACCGTCGACTCGATGTGCACGGGCGGCTTCGTCCTGGACGTCGAGTTCGCCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGGTCCTCGACAAGGACATCACCAAGATCCACCGGGCCGGTGTCCAGCTCGTGCC
GGACGCGGGGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGCGTCTCGAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCCATGTGCCTGATCGCGCTGTACGTGAACGGGGAGCGGCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCGACCCTTGAGCGCTACAAGCTCCGCCTGGACGAGGTGGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGCCGGTTGCTGTCCCTGCAACTGGACGAGCTGATCGCG
GGGGTCGAGCCCGAGCGGGAGCTGGTCGTACGGGACTACGTGCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGCGCGAGCTCAACGACCTCACGCATGCGGAGCTGCTCGAACTGCCCATAGTGGCAAGGGCGTTGGGCTACAGCG
GCTCCCCCGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTATCGCCTTTTGGCGAAGGTGCCGCGCCTGCCGGGCGCG
ATCATCGAGCGCCTCGTCGAACATTTCGGCGGCCTGCAGAAACTGCTGGCCGCCTCGGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGAGAGGCGCGGGCCCGGAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGAGCTCGATTCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438