Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   MAK48_RS01980 Genome accession   NZ_CP091872
Coordinates   371455..371853 (-) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus sp. Man122     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 366455..376853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MAK48_RS01950 (MAK48_01950) - 367148..367828 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  MAK48_RS01955 (MAK48_01955) - 367838..368701 (-) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  MAK48_RS01960 (MAK48_01960) - 368863..369060 (+) 198 Protein_342 hypothetical protein -
  MAK48_RS01965 (MAK48_01965) - 369097..369417 (+) 321 Protein_343 RDD family protein -
  MAK48_RS01970 (MAK48_01970) - 369499..369831 (+) 333 WP_003246247.1 YckD family protein -
  MAK48_RS01975 (MAK48_01975) bglC 369985..371418 (+) 1434 WP_003246242.1 6-phospho-beta-glucosidase -
  MAK48_RS01980 (MAK48_01980) nin/comJ 371455..371853 (-) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  MAK48_RS01985 (MAK48_01985) nucA/comI 371880..372329 (-) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  MAK48_RS01990 (MAK48_01990) tlpC 372497..374218 (-) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  MAK48_RS01995 (MAK48_01995) hxlB 374329..374886 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  MAK48_RS02000 (MAK48_02000) hxlA 374892..375524 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  MAK48_RS02005 (MAK48_02005) hxlR 375757..376119 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=653992 MAK48_RS01980 WP_003246342.1 371455..371853(-) (nin/comJ) [Bacillus sp. Man122]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=653992 MAK48_RS01980 WP_003246342.1 371455..371853(-) (nin/comJ) [Bacillus sp. Man122]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1