Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OHA17_RS10750 Genome accession   NZ_CP108115
Coordinates   2376756..2377544 (+) Length   262 a.a.
NCBI ID   WP_053726378.1    Uniprot ID   A0ABV9UWH9
Organism   Streptomyces sp. NBC_00212     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2371756..2382544
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA17_RS10735 (OHA17_10660) - 2371987..2372517 (+) 531 WP_406506168.1 TerD family protein -
  OHA17_RS10740 (OHA17_10665) - 2372629..2375523 (-) 2895 WP_406506170.1 vitamin B12-dependent ribonucleotide reductase -
  OHA17_RS10745 (OHA17_10670) nrdR 2375678..2376199 (-) 522 WP_398879863.1 transcriptional regulator NrdR -
  OHA17_RS10750 (OHA17_10675) dinR/lexA 2376756..2377544 (+) 789 WP_053726378.1 transcriptional repressor LexA Regulator
  OHA17_RS10755 (OHA17_10680) - 2377652..2379622 (-) 1971 WP_406506173.1 ATP-dependent DNA helicase -
  OHA17_RS10760 (OHA17_10685) - 2379660..2381585 (-) 1926 WP_406506175.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 28326.02 Da        Isoelectric Point: 7.4237

>NTDB_id=653985 OHA17_RS10750 WP_053726378.1 2376756..2377544(+) (dinR/lexA) [Streptomyces sp. NBC_00212]
MTTTADSATITAQDRSQTRLEPVHAMNDAVTNQGADAGRARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPS
MREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTAGKPAASYVPLVGRIAAGGPILAEES
VEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDNHIWLLPHNAA
YQPIPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 789 bp        

>NTDB_id=653985 OHA17_RS10750 WP_053726378.1 2376756..2377544(+) (dinR/lexA) [Streptomyces sp. NBC_00212]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGACCCGACTTGAGCCGGTGCATGCCATGAA
TGACGCAGTCACGAACCAGGGGGCGGACGCCGGGCGCGCCCGTTCGCTGCCCGGCCGACCTCCAGGGATCAGGGCGGACA
GCTCCGGGCTCACCGACCGGCAGCGGCGGGTCATCGAAGTCATCAGGGACTCCGTGCAGCGGCGTGGCTACCCGCCGTCG
ATGCGGGAGATCGGCCAGGCCGTCGGCCTCTCCAGCACCTCGTCCGTCGCCCACCAGCTGATGGCCCTGGAGCGCAAGGG
CTTCCTGCGCCGCGACCCGCACCGGCCCCGCGCGTACGAGGTCCGCGGCTCCGACCAGCCGAGCAGCCAGCCCACCGACA
CCGCGGGCAAGCCCGCCGCCTCGTACGTGCCGCTGGTGGGCCGGATCGCCGCCGGCGGCCCGATCCTCGCCGAGGAGTCG
GTCGAGGACGTCTTCCCCCTCCCCCGCCAGCTGGTCGGCGACGGCGAACTCTTCGTCCTGAAGGTCGTCGGCGACTCGAT
GATCGAAGCCGCGATCTGTGACGGCGACTGGGTCACGGTGCGCCGCCAGCCCGTCGCCGAGAACGGCGACATCGTCGCCG
CGATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACAACCACATCTGGCTGCTCCCGCACAACGCCGCC
TACCAGCCGATTCCCGGCGACGACGCGACCATTCTCGGCAAGGTCGTGGCGGTGCTCCGGCGGGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(55-118)

Peptidase S24-like (Peptidase_S24)

(144-256)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

47.17

80.916

0.382