Detailed information NTG0065394

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CVPH_RS10395
• Genome accession: NZ_AP012977
• Coordinates: 1476019..1476219 (-)
• Length: 66 a.a.
• NCBI ID: WP_225879710.1
• Uniprot ID: -
• Organism: Abyssogena phaseoliformis symbiont OG214
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1471019..1481219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVPH_RS09370	-	1471160..1471516 (-)	357	WP_201341447.1	DpnII family type II restriction endonuclease	-
CVPH_RS09375	-	1471497..1471718 (-)	222	WP_201341448.1	hypothetical protein	-
CVPH_RS10575	-	1472184..1472585 (-)	402	WP_342590479.1	DNA adenine methylase	-
CVPH_RS10885	-	1472491..1472733 (-)	243	WP_342590436.1	DNA adenine methylase	-
CVPH_RS10890	-	1472754..1472951 (-)	198	WP_281064644.1	DNA adenine methylase	-
CVPH_RS09385 (CVPH_1501)	topA	1472998..1475361 (-)	2364	WP_201341449.1	type I DNA topoisomerase	-
CVPH_RS09390 (CVPH_1502)	-	1475361..1475829 (-)	469	Protein_1897	DUF494 domain-containing protein	-
CVPH_RS09395	-	1475837..1476022 (-)	186	WP_281064683.1	hypothetical protein	-
CVPH_RS10395	dprA	1476019..1476219 (-)	201	WP_225879710.1	DNA-processing protein DprA	Machinery gene
CVPH_RS10400	-	1476314..1476676 (-)	363	WP_225879711.1	DNA-processing protein DprA	-
CVPH_RS09405 (CVPH_1504)	rpmH	1476975..1477115 (+)	141	WP_201341451.1	50S ribosomal protein L34	-
CVPH_RS09410 (CVPH_1505)	rnpA	1477125..1477466 (+)	342	WP_201341452.1	ribonuclease P protein component	-
CVPH_RS09415 (CVPH_1506)	yidD	1477466..1477681 (+)	216	WP_201341453.1	membrane protein insertion efficiency factor YidD	-
CVPH_RS09420 (CVPH_1507)	yidC	1477710..1479335 (+)	1626	WP_201341454.1	membrane protein insertase YidC	-
CVPH_RS09425 (CVPH_1508)	-	1479328..1480203 (+)	876	WP_225879712.1	TauD/TfdA family dioxygenase	-
CVPH_RS09430 (CVPH_1509)	ampD	1480219..1480743 (+)	525	WP_201341455.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-

Sequence

Protein

• Length: 66 a.a.
• Molecular weight: 7122.48 Da
• Isoelectric Point: 9.9168

>NTDB_id=65394 CVPH_RS10395 WP_225879710.1 1476019..1476219(-) (dprA) [Abyssogena phaseoliformis symbiont OG214]
MITAKLAAEQGKEVFAKPSLIHNPLSKGCHQLIKQGAKLTDNIEDILSELPKGLGLSVPFKKSLLI

Nucleotide

• Length: 201 bp

>NTDB_id=65394 CVPH_RS10395 WP_225879710.1 1476019..1476219(-) (dprA) [Abyssogena phaseoliformis symbiont OG214]
ATGATTACTGCAAAATTAGCCGCTGAACAAGGCAAGGAAGTGTTTGCAAAACCCAGTTTAATTCATAACCCATTATCAAA
GGGCTGTCATCAACTTATTAAGCAAGGCGCTAAATTAACTGACAATATTGAAGACATATTATCTGAGCTACCCAAGGGTT
TGGGTTTGTCAGTTCCATTTAAAAAAAGTCTGTTGATATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (1-40)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae strain FA1090	64.706	77.273	0.5
dprA	Neisseria gonorrhoeae MS11	64.706	77.273	0.5
dprA	Neisseria meningitidis MC58	62.745	77.273	0.485
dprA	Neisseria meningitidis strain C311	62.745	77.273	0.485
dprA	Vibrio cholerae strain A1552	44.928	100	0.47
dprA	Haemophilus influenzae Rd KW20	58	75.758	0.439
dprA	Glaesserella parasuis strain SC1401	61.702	71.212	0.439
dprA	Bacillus subtilis subsp. subtilis str. 168	45.902	92.424	0.424
dprA	Acinetobacter baylyi ADP1	54	75.758	0.409
dprA	Legionella pneumophila strain ERS1305867	54	75.758	0.409
dprA	Acinetobacter baumannii D1279779	54	75.758	0.409
dprA	Acinetobacter baumannii strain A118	54	75.758	0.409
dprA	Vibrio campbellii strain DS40M4	44.828	87.879	0.394
dprA/cilB/dalA	Streptococcus pneumoniae D39	48	75.758	0.364
dprA/cilB/dalA	Streptococcus pneumoniae R6	48	75.758	0.364
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	48	75.758	0.364
dprA/cilB/dalA	Streptococcus mitis SK321	48	75.758	0.364
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	48	75.758	0.364
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	48	75.758	0.364
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.636	83.333	0.364