Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG230_RS15760 Genome accession   NZ_CP108101
Coordinates   3649958..3651082 (+) Length   374 a.a.
NCBI ID   WP_328910848.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00234     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3644958..3656082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG230_RS15745 (OG230_15745) - 3645487..3646329 (+) 843 WP_328910845.1 hypothetical protein -
  OG230_RS15750 (OG230_15750) - 3646466..3648343 (-) 1878 WP_328910846.1 hypothetical protein -
  OG230_RS15755 (OG230_15755) radA/sms 3648465..3649877 (+) 1413 WP_328910847.1 DNA repair protein RadA Machinery gene
  OG230_RS15760 (OG230_15760) disA 3649958..3651082 (+) 1125 WP_328910848.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG230_RS15765 (OG230_15765) - 3651183..3651983 (-) 801 WP_328911415.1 hypothetical protein -
  OG230_RS15770 (OG230_15770) - 3652213..3653115 (+) 903 WP_328910849.1 A/G-specific adenine glycosylase -
  OG230_RS15775 (OG230_15775) - 3653286..3653906 (+) 621 WP_328910850.1 SigE family RNA polymerase sigma factor -
  OG230_RS15780 (OG230_15780) - 3653999..3654634 (+) 636 WP_328911416.1 hypothetical protein -
  OG230_RS15785 (OG230_15785) cseB 3654664..3655377 (+) 714 WP_328910851.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40324.28 Da        Isoelectric Point: 4.9406

>NTDB_id=653683 OG230_RS15760 WP_328910848.1 3649958..3651082(+) (disA) [Streptomyces sp. NBC_00234]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653683 OG230_RS15760 WP_328910848.1 3649958..3651082(+) (disA) [Streptomyces sp. NBC_00234]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGGGGCAACACCGGCGGGCTGATCGTCC
TCGGCATGGACAAAACCGTCGAATCCATGTGTACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGT
GAGCTGTGCAAGCTCGACGGTGCGCTGATCCTCGACAAGGACATGACGAAGATTCTCCGGGCCGGCGTCCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGGACGGCGGACCGGGTCTCGAAAGCCTGCGGCTTCCCGG
TCGTGTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTCGACGGGGAACGCCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCGCGCGCCAACCAGGCACTCGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACCGCCGTCGCGCAGCGCCTCGAAATGGTCCGCCGCATCG
CGACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCCGAGCGGGAGCTCGTCGTACGCGACTACGTGCCGGAACCGACCGCGAAGCGGTCCCGCACGGTCGCCGA
GGCACTGACGGAGCTGGACGCGCTCTCGCACACCGAGCTGCTGGAACTGCCGGTCGTGGCAAGGGCGTTGGGGTACAGCG
GCTCTCCGGAGACGCTGGACTCCGCGGTGTCGCCGCGGGGATTCAGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGATCTCCAGACGGTCGA
CGGGGTCGGGGAGGCGCGGGCACGGAGCGTGCGCGAGGGACTGTCCCGGCTGGCGGAGTCGTCGATTCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436