Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   L6Y89_RS07555 Genome accession   NZ_CP091779
Coordinates   1623440..1624066 (+) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain ACYC.E9L     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1618440..1629066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L6Y89_RS07535 (L6Y89_07535) - 1618838..1620598 (-) 1761 WP_237846798.1 Lon protease family protein -
  L6Y89_RS07540 (L6Y89_07540) matP 1620785..1621237 (+) 453 WP_010429344.1 macrodomain Ter protein MatP -
  L6Y89_RS07545 (L6Y89_07545) ompA 1621302..1622357 (-) 1056 WP_010429345.1 porin OmpA -
  L6Y89_RS07550 (L6Y89_07550) sulA 1622713..1623222 (-) 510 WP_089598374.1 SOS-induced cell division inhibitor SulA -
  L6Y89_RS07555 (L6Y89_07555) sxy/tfoX 1623440..1624066 (+) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  L6Y89_RS07560 (L6Y89_07560) yccS 1624023..1626185 (-) 2163 WP_237846800.1 YccS family putative transporter -
  L6Y89_RS07565 (L6Y89_07565) - 1626204..1626650 (-) 447 WP_100165146.1 YccF domain-containing protein -
  L6Y89_RS07570 (L6Y89_07570) helD 1626774..1628828 (+) 2055 WP_237846807.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=653606 L6Y89_RS07555 WP_042719042.1 1623440..1624066(+) (sxy/tfoX) [Enterobacter mori strain ACYC.E9L]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=653606 L6Y89_RS07555 WP_042719042.1 1623440..1624066(+) (sxy/tfoX) [Enterobacter mori strain ACYC.E9L]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTCGGTGGTTACACCCTGGCGGTGGATAACGCGGTGTTCGCGATGGTGTCGGAGGGGGAACTCTACCTCCGGGCCTGTG
AAGAAAGTGCCAGGTATTGTGTCAAAAACGCCTCTTCGTTTCTGACGCTGATGAAACGGGGCCGTCCCGTCCTGCTTAAT
TATTATCGGGTGGACGACGGGCTGTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
AAAGGAGCGCTGTCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCAAACCTGACTTTTCAACTTGAGGTACTGCTTT
TAGAAGCAGGCATCACTAATGAGGAAACCTTACGGGAACTGGGCGCCAGGAAATGCTGGTTAAAGATGAGGTCCAAAAAC
AAGGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATTGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGCTGACAGAGTGGTTTAATGCACTGCCCGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572