Detailed information NTG0653531

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: L6503_RS05250
• Genome accession: NZ_CP091770
• Coordinates: 1110918..1112351 (-)
• Length: 477 a.a.
• NCBI ID: WP_237775429.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain K115
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1105918..1117351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6503_RS05225 (L6503_05225)	recG	1107050..1108915 (-)	1866	WP_237775428.1	ATP-dependent DNA helicase RecG	-
L6503_RS05230 (L6503_05230)	-	1108997..1109350 (+)	354	WP_000837005.1	hypothetical protein	-
L6503_RS05235 (L6503_05235)	-	1109354..1109989 (+)	636	WP_000668030.1	outer membrane protein	-
L6503_RS05240 (L6503_05240)	-	1109986..1110738 (-)	753	WP_000767569.1	exodeoxyribonuclease III	-
L6503_RS05250 (L6503_05250)	comH	1110918..1112351 (-)	1434	WP_237775429.1	competence protein	Machinery gene
L6503_RS05255 (L6503_05255)	dnaA	1112572..1113938 (-)	1367	Protein_1026	chromosomal replication initiator protein DnaA	-
L6503_RS05260 (L6503_05260)	-	1114091..1114633 (+)	543	WP_237775430.1	purine-nucleoside phosphorylase	-
L6503_RS05265 (L6503_05265)	-	1114669..1114908 (+)	240	WP_078295313.1	DUF2443 family protein	-
L6503_RS05270 (L6503_05270)	glmS	1114909..1116702 (+)	1794	WP_096425342.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
L6503_RS05275 (L6503_05275)	thyX	1116725..1117351 (+)	627	WP_000451941.1	FAD-dependent thymidylate synthase	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54736.75 Da
• Isoelectric Point: 6.7660

>NTDB_id=653531 L6503_RS05250 WP_237775429.1 1110918..1112351(-) (comH) [Helicobacter pylori strain K115]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELYPHQMPSLNVPIQKPQNKPTSSQQSLQNFPYTESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLKHSSEDQENNLFIVPPTEKTLPNNNADISENNESNENRDSVEKQAIRDPNVKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQARSS
TEKCKRARARKDGTIRQCYLIEEPLKQAWESEYEITTQLVKATYERPKQDDQIEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=653531 L6503_RS05250 WP_237775429.1 1110918..1112351(-) (comH) [Helicobacter pylori strain K115]
ATGAAAAAAACCCTTTGTCTTTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGGCAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAATACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTATATCCGCACCAAATGCCTTCTTTAAATGTGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTCTTCAAAACTTTCCTTACACAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGTGCCACCCACTGAAAAAACGCTCCCTAACAACAACGCTGATATTAGTGAAA
ACAATGAGAGTAATGAAAATAGGGATAGTGTGGAAAAACAAGCGATTAGAGATCCTAATGTTAAAGAATTTGCGTGCGGG
AAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAGCAGACTGC
GACAGACATTACCCCTTGTGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCTAGAAGCTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTCATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCACTTATGAGCGCCCCAAACAAGACGATCAGATAG
AGCCGACTTTCTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCATAATGAATTGAATTTG
AATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTTAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.693	100	0.931