Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG764_RS16415 Genome accession   NZ_CP108095
Coordinates   3749897..3751021 (+) Length   374 a.a.
NCBI ID   WP_328969159.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00239     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3744897..3756021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG764_RS16400 (OG764_16395) - 3745330..3746175 (+) 846 WP_328969156.1 hypothetical protein -
  OG764_RS16405 (OG764_16400) - 3746340..3748202 (-) 1863 WP_328969157.1 hypothetical protein -
  OG764_RS16410 (OG764_16405) radA/sms 3748340..3749785 (+) 1446 WP_328969158.1 DNA repair protein RadA Machinery gene
  OG764_RS16415 (OG764_16410) disA 3749897..3751021 (+) 1125 WP_328969159.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG764_RS16420 (OG764_16415) - 3751173..3752000 (-) 828 WP_328969160.1 hypothetical protein -
  OG764_RS16425 (OG764_16420) - 3752159..3752764 (+) 606 WP_328969161.1 phosphatase PAP2 family protein -
  OG764_RS16430 (OG764_16425) - 3752793..3753770 (+) 978 WP_328969162.1 A/G-specific adenine glycosylase -
  OG764_RS16435 (OG764_16430) - 3753942..3754502 (+) 561 WP_328969163.1 SigE family RNA polymerase sigma factor -
  OG764_RS16440 (OG764_16435) - 3754538..3755155 (+) 618 WP_328969164.1 hypothetical protein -
  OG764_RS16445 (OG764_16440) cseB 3755165..3755866 (+) 702 WP_328969165.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40467.40 Da        Isoelectric Point: 5.1240

>NTDB_id=653524 OG764_RS16415 WP_328969159.1 3749897..3751021(+) (disA) [Streptomyces sp. NBC_00239]
MAAKDGAAASGKSGASSRHEALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDLLTHAELLELPVVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653524 OG764_RS16415 WP_328969159.1 3749897..3751021(+) (disA) [Streptomyces sp. NBC_00239]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCCGGCGCGAGCTCCAGACACGAGGCCCTGATGCGTGCCTCGCT
GAGCGCGGTCGCCCCTGGTCAGCCCCTGCGTGACGGGCTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTGATCGTCC
TGGGCATGGACAAGGCCGTCGAGTCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGTGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCACACCGAGGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTCTCGCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGCGAGCGCCGGGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCGGGCACCCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTCACGGCGGTCGCGCAGCGGCTGGAAATGGTGCGCCGGATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGCCGGCTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGCGAGCTGGTCATCCGCGACTACGTCCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTCGCCGAGCTGGACCTGCTGACCCACGCCGAGCTGCTCGAACTGCCCGTCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCCGAGACCCTCGACTCGGCGGTCTCGCCGCGCGGTTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTGCAGACGGTCGA
CGGCGTCGGCGAGGCGCGCGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCCGAGTCCTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441