Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OHT59_RS31660 Genome accession   NZ_CP108094
Coordinates   7120726..7122459 (-) Length   577 a.a.
NCBI ID   WP_266464318.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00243     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 7115726..7127459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT59_RS31650 (OHT59_31660) - 7117233..7118549 (+) 1317 WP_326723275.1 RNA polymerase sigma factor -
  OHT59_RS31655 (OHT59_31665) rcrQ 7118798..7120726 (-) 1929 WP_326723276.1 ABC transporter ATP-binding protein Regulator
  OHT59_RS31660 (OHT59_31670) rcrP 7120726..7122459 (-) 1734 WP_266464318.1 ABC transporter ATP-binding protein Regulator
  OHT59_RS31665 (OHT59_31675) - 7122609..7124063 (-) 1455 WP_326723277.1 FGGY family carbohydrate kinase -
  OHT59_RS31670 (OHT59_31680) - 7124150..7124455 (-) 306 WP_326723278.1 YtxH domain-containing protein -
  OHT59_RS31690 (OHT59_31700) - 7125578..7125841 (-) 264 WP_326723279.1 hypothetical protein -
  OHT59_RS31695 (OHT59_31705) - 7125838..7126002 (-) 165 WP_326723280.1 hypothetical protein -
  OHT59_RS31700 (OHT59_31710) - 7125989..7126262 (-) 274 Protein_6265 TMEM165/GDT1 family protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62520.75 Da        Isoelectric Point: 6.5101

>NTDB_id=653466 OHT59_RS31660 WP_266464318.1 7120726..7122459(-) (rcrP) [Streptomyces sp. NBC_00243]
MLIRLLRTYLRPYKKPIALLVLLQLLQTCATLYLPTLNAHIIDNGVVKGDTGYILSFGAVMIAISLAQVVCNIGAVYYGA
RTASAVGRDIRGAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLALMTFTLLVSAPIMCVGGIVLALGLDVPLSGV
LVAVVPVLGLGVTLIIRRLRPLFRSMQVRLDTVNRVLREQITGNRVIRAFVRDDYEKERFRKANADLTEVSLGTGRYLAL
MFPMVMTVVNLSSIAVVWFGAHRIDSGGMQIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTDSSVVP
PTAPVVELRRHGHLEIRGGGFRYPGAEEPVLTAVDLVARPGETTAVIGSTGSGKSTLLGLVPRLFDATDGEVLVDGVDVA
TIEPRLLAKTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKGFVEGLENGLDSPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYKTDAMLRAALAAETAEATVVIVAQRVSTIRDADRIVVLDEGRVVGTGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=653466 OHT59_RS31660 WP_266464318.1 7120726..7122459(-) (rcrP) [Streptomyces sp. NBC_00243]
GTGCTCATACGACTACTGCGTACGTACCTCCGTCCGTACAAGAAACCCATCGCCCTGCTGGTGCTGCTGCAGCTCCTGCA
GACCTGCGCCACGCTCTACCTGCCCACGCTCAACGCGCACATCATTGACAACGGTGTCGTGAAGGGCGACACGGGATACA
TCCTGTCCTTCGGCGCCGTGATGATCGCGATCTCGCTGGCGCAGGTCGTCTGCAACATCGGCGCCGTCTACTACGGCGCC
CGTACGGCGTCGGCCGTCGGCCGGGACATCCGGGGCGCCGTCTTCGACCGCGTCCAGTCCTTCTCCGCGCGCGAGGTCGG
CCACTTCGGGGCGCCCTCGCTGATCACCCGCACCACCAATGACGTCCAGCAGGTGCAGATGCTCGCCCTGATGACGTTCA
CCCTGCTGGTGTCGGCGCCGATCATGTGTGTGGGCGGCATCGTGCTGGCCCTCGGCCTGGACGTGCCGCTGTCCGGGGTG
CTGGTCGCCGTGGTGCCGGTACTCGGCCTCGGTGTGACCCTGATCATCCGGCGGCTGCGGCCGCTGTTCCGCTCCATGCA
GGTCCGCCTGGACACCGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGTGTGATCCGCGCCTTCGTACGGGACG
ACTACGAGAAGGAGCGCTTCCGGAAGGCGAACGCCGATCTGACCGAGGTGTCGCTGGGCACCGGGCGGTACCTGGCACTG
ATGTTCCCGATGGTCATGACCGTCGTGAACCTGTCCTCGATCGCCGTCGTGTGGTTCGGCGCGCACCGGATCGACAGCGG
GGGCATGCAGATCGGTGATCTGACCGCGTTCCTCGCCTACCTCATGCAGATCGTGATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTCTGTGCCGAGCGCATCCAGGAGGTCCTGGACACCGACAGCAGTGTGGTGCCG
CCGACCGCACCCGTCGTGGAGCTGCGTCGCCACGGCCACCTGGAGATCCGGGGCGGCGGGTTCCGTTACCCGGGTGCCGA
GGAGCCGGTGCTGACGGCCGTCGACCTGGTGGCGCGGCCGGGTGAGACGACCGCCGTGATCGGGTCCACGGGCAGTGGCA
AGTCGACGCTTCTCGGGCTCGTCCCCCGGCTGTTCGACGCCACCGACGGCGAGGTGCTCGTCGACGGCGTGGACGTGGCG
ACCATCGAGCCGAGACTCCTTGCCAAGACGGTCGGACTCGTCCCGCAGAAGCCGTATCTCTTCGCGGGCACGGTGGCGAC
GAACCTGCGGTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGGGTTCG
TGGAGGGCCTGGAGAACGGGCTCGACTCCCCCATCGCACAGGGCGGCACGAATGTGTCCGGTGGTCAGCGGCAGCGTCTC
GCGATCGCCCGCACCCTCGTACAGCGGCCGGAGATCTACCTCTTCGACGACTCGTTCTCGGCGCTCGACTACAAGACCGA
CGCCATGCTGCGCGCGGCGCTCGCCGCGGAGACCGCCGAGGCGACCGTGGTGATCGTCGCCCAGCGGGTGTCGACCATCC
GGGACGCCGACCGGATCGTGGTCCTCGACGAGGGCCGGGTCGTCGGCACCGGGCGGCACCACGAACTGATGGCGGGCAAC
GAGACATACCGGGAGATCGTCCTCTCCCAGCTGACGGAAGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(352-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.034

100

0.404