Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG259_RS23515 Genome accession   NZ_CP108088
Coordinates   5170106..5171230 (-) Length   374 a.a.
NCBI ID   WP_266893207.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00250     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5165106..5176230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG259_RS23490 (OG259_23505) - 5165434..5166222 (-) 789 WP_328944054.1 hypothetical protein -
  OG259_RS23495 (OG259_23510) - 5166210..5166782 (-) 573 WP_266893215.1 SigE family RNA polymerase sigma factor -
  OG259_RS23500 (OG259_23515) - 5167053..5168036 (-) 984 WP_328944055.1 A/G-specific adenine glycosylase -
  OG259_RS23505 (OG259_23520) - 5168246..5168917 (-) 672 WP_328944056.1 phosphatase PAP2 family protein -
  OG259_RS23510 (OG259_23525) - 5169165..5170028 (+) 864 WP_328944057.1 hypothetical protein -
  OG259_RS23515 (OG259_23530) disA 5170106..5171230 (-) 1125 WP_266893207.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG259_RS23520 (OG259_23535) radA/sms 5171689..5173092 (-) 1404 WP_266893205.1 DNA repair protein RadA Machinery gene
  OG259_RS23525 (OG259_23540) - 5173254..5175062 (+) 1809 WP_328944058.1 hypothetical protein -
  OG259_RS23530 (OG259_23545) - 5175085..5175840 (-) 756 WP_328947158.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40210.04 Da        Isoelectric Point: 5.0197

>NTDB_id=653296 OG259_RS23515 WP_266893207.1 5170106..5171230(-) (disA) [Streptomyces sp. NBC_00250]
MAAKDGASAPGKSGAGSGNEALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESGT
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVIRDYVPEPTAKRSRTVAEALTELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653296 OG259_RS23515 WP_266893207.1 5170106..5171230(-) (disA) [Streptomyces sp. NBC_00250]
GTGGCAGCCAAGGACGGGGCATCAGCTCCTGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCGCTGATGCGCGCCGCCCT
GAGCGCCGTCGCGCCGGGCACCGCGCTGCGTGACGGCCTGGAGCGGATCCTCCGCGGCAACACGGGCGGTCTCATCGTGC
TGGGCCTGGACAAGACGGTCGACTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCGCCGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATCCACCGCGCGGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGCGAGCGACGGGTCCTGGAGGAGTCGGGCACG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTGGCCGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCACCGCCGTCGCCCAGCGTCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTCGAGCTCGGTACGGACGGGCGGCTCCTCTCGCTCCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGATCCGGGACTACGTGCCGGAGCCGACGGCCAAGCGCTCGCGGACGGTGGCGGA
GGCGCTCACCGAGCTGGACGCGCTGACCCACACCGAGCTGCTCGAACTTCCGGTCGTGGCGCGTGCGCTGGGCTACAGCG
GTTCGCCCGAGACCCTCGACTCGGCGGTCTCGCCGCGCGGCTACCGGCTCCTCGCCAAGGTGCCGAGACTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCGGCCAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGCAGCGTGCGCGAGGGTCTGTCCCGGCTGGCGGAGTCCTCGATCCTGGAACGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438