Detailed information NTG0652968

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: L4998_RS05345
• Genome accession: NZ_CP091644
• Coordinates: 1024100..1024837 (+)
• Length: 245 a.a.
• NCBI ID: WP_002824859.1
• Uniprot ID: A0A2A4L6Q8
• Organism: Campylobacter coli strain YH504
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1019100..1029837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L4998_RS05315 (L4998_05315)	rpsF	1019247..1019624 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
L4998_RS05320 (L4998_05320)	-	1019633..1020181 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
L4998_RS05325 (L4998_05325)	rpsR	1020192..1020452 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
L4998_RS05330 (L4998_05330)	lon	1020509..1022884 (-)	2376	WP_057032694.1	endopeptidase La	-
L4998_RS05335 (L4998_05335)	bamD	1022900..1023547 (-)	648	WP_002803789.1	outer membrane protein assembly factor BamD	-
L4998_RS05340 (L4998_05340)	fliW	1023711..1024100 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
L4998_RS05345 (L4998_05345)	proC	1024100..1024837 (+)	738	WP_002824859.1	pyrroline-5-carboxylate reductase	Machinery gene
L4998_RS05350 (L4998_05350)	-	1024834..1025139 (+)	306	WP_052784994.1	hypothetical protein	-
L4998_RS05355 (L4998_05355)	-	1025132..1025800 (+)	669	WP_058001839.1	hypothetical protein	-
L4998_RS05360 (L4998_05360)	-	1025797..1026249 (+)	453	WP_002777117.1	hypothetical protein	-
L4998_RS05365 (L4998_05365)	-	1026242..1026871 (-)	630	WP_002824854.1	uroporphyrinogen-III synthase	-
L4998_RS05370 (L4998_05370)	thiE	1026849..1027481 (-)	633	WP_002824853.1	thiamine phosphate synthase	-
L4998_RS05375 (L4998_05375)	thiD	1027471..1028283 (-)	813	WP_002824851.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
L4998_RS05380 (L4998_05380)	-	1028283..1028966 (-)	684	WP_002824849.1	3-methyladenine DNA glycosylase	-
L4998_RS05385 (L4998_05385)	-	1028963..1029724 (-)	762	WP_025399045.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26811.23 Da
• Isoelectric Point: 9.4758

>NTDB_id=652968 L4998_RS05345 WP_002824859.1 1024100..1024837(+) (proC) [Campylobacter coli strain YH504]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLRLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEIIEILNTFGKAYALNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAATLLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=652968 L4998_RS05345 WP_002824859.1 1024100..1024837(+) (proC) [Campylobacter coli strain YH504]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAACTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAGACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAATCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGCGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCCAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAACCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACTATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTCTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A2A4L6Q8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792