Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   OG766_RS27695 Genome accession   NZ_CP108080
Coordinates   6150224..6150877 (-) Length   217 a.a.
NCBI ID   WP_266387757.1    Uniprot ID   A0ACC6QPY2
Organism   Streptomyces sp. NBC_00259     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 6145224..6155877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG766_RS27675 (OG766_27670) - 6145830..6147389 (+) 1560 WP_328726434.1 MFS transporter -
  OG766_RS27680 (OG766_27675) - 6147398..6147793 (-) 396 WP_266387766.1 ATP-binding protein -
  OG766_RS27685 (OG766_27680) - 6147895..6148590 (-) 696 WP_328726435.1 trimeric intracellular cation channel family protein -
  OG766_RS27690 (OG766_27685) - 6148952..6150121 (+) 1170 WP_328726436.1 histidine kinase -
  OG766_RS27695 (OG766_27690) vraR 6150224..6150877 (-) 654 WP_266387757.1 response regulator transcription factor Regulator
  OG766_RS27700 (OG766_27695) - 6151206..6152243 (-) 1038 WP_328726437.1 DUF2332 domain-containing protein -
  OG766_RS27705 (OG766_27700) - 6153149..6153298 (+) 150 WP_328726438.1 hypothetical protein -
  OG766_RS27710 (OG766_27705) - 6153323..6154537 (+) 1215 WP_328726439.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 23262.59 Da        Isoelectric Point: 4.8396

>NTDB_id=652941 OG766_RS27695 WP_266387757.1 6150224..6150877(-) (vraR) [Streptomyces sp. NBC_00259]
MVIHVLIADDSEIVRRGLSDIVEAGDDLHVVAQAWDGRSAVDAARQFSPDVALLDIRMPGMDGLAATREIRALPRPPRVL
ILTTFSSDEYVDEAVRAGASGFLLKDTPPEELLRAVRQVAEGMATLDPAVTGRVLEVLAGQSAQLTEAEKQVLESLTDRD
LQVLRLIAKGLSNADIGAALHISEGTVKGQVSRLLAKVGADNRVQAARLAYRAGLER

Nucleotide


Download         Length: 654 bp        

>NTDB_id=652941 OG766_RS27695 WP_266387757.1 6150224..6150877(-) (vraR) [Streptomyces sp. NBC_00259]
ATGGTGATCCATGTCCTGATCGCCGACGACAGCGAGATCGTGCGCCGAGGGCTGAGCGACATCGTCGAGGCCGGCGACGA
CCTGCATGTCGTCGCCCAGGCCTGGGACGGCCGCAGCGCTGTGGACGCCGCGCGGCAGTTCAGCCCTGACGTCGCGCTGC
TGGACATCCGGATGCCGGGCATGGACGGGCTGGCCGCGACCCGGGAGATCAGGGCGCTGCCGCGGCCGCCGCGGGTGCTG
ATCCTGACGACGTTCAGCTCGGACGAGTACGTCGACGAGGCCGTACGGGCGGGCGCCAGCGGGTTCCTCCTGAAGGACAC
GCCTCCGGAGGAGCTGCTGCGTGCCGTACGTCAGGTCGCCGAGGGCATGGCGACGCTGGACCCGGCGGTGACCGGCCGGG
TCCTGGAGGTACTGGCCGGGCAATCGGCGCAGCTGACGGAGGCGGAGAAGCAGGTCCTGGAGTCCCTGACGGACCGCGAT
CTCCAGGTGCTCCGGCTGATCGCCAAAGGGCTGTCCAACGCCGATATCGGCGCTGCTCTGCACATCAGCGAGGGCACGGT
CAAAGGCCAGGTCAGCAGGCTGCTGGCGAAGGTCGGCGCGGACAACCGGGTGCAGGCCGCCCGGCTGGCCTACCGGGCGG
GGCTGGAACGCTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(154-210)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

36.574

99.539

0.364