Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG766_RS26545 Genome accession   NZ_CP108080
Coordinates   5854765..5855559 (-) Length   264 a.a.
NCBI ID   WP_328726336.1    Uniprot ID   A0ACC6QP96
Organism   Streptomyces sp. NBC_00259     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5849765..5860559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG766_RS26530 (OG766_26525) - 5849965..5850762 (+) 798 WP_266388430.1 GNAT family N-acetyltransferase -
  OG766_RS26535 (OG766_26530) - 5850841..5852643 (+) 1803 WP_266388427.1 IucA/IucC family siderophore biosynthesis protein -
  OG766_RS26540 (OG766_26535) - 5852705..5854678 (+) 1974 WP_266388424.1 ATP-dependent DNA helicase -
  OG766_RS26545 (OG766_26540) dinR/lexA 5854765..5855559 (-) 795 WP_328726336.1 transcriptional repressor LexA Regulator
  OG766_RS26550 (OG766_26545) nrdR 5856106..5856618 (+) 513 WP_328726337.1 transcriptional regulator NrdR -
  OG766_RS26555 (OG766_26550) - 5856780..5859680 (+) 2901 WP_328726338.1 vitamin B12-dependent ribonucleotide reductase -
  OG766_RS26560 (OG766_26555) - 5859823..5860353 (-) 531 WP_266388412.1 TerD family protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28556.29 Da        Isoelectric Point: 6.9854

>NTDB_id=652934 OG766_RS26545 WP_328726336.1 5854765..5855559(-) (dinR/lexA) [Streptomyces sp. NBC_00259]
MTTTADSATITAQDRSQNRFEPVHAMNDAVTTPEGAEPSRPGRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPATQATDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=652934 OG766_RS26545 WP_328726336.1 5854765..5855559(-) (dinR/lexA) [Streptomyces sp. NBC_00259]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAACCGATTCGAGCCGGTGCATGCCATGAA
TGACGCAGTCACGACCCCGGAGGGCGCCGAGCCCTCGCGACCTGGGCGTTCGCTGCCCGGCCGACCTCCAGGGATCCGCG
CCGACAGCTCCGGTCTCACGGACCGGCAGCGAAGGGTCATCGAAGTCATCCGCGATTCCGTGCAGCGGCGGGGATACCCG
CCGTCGATGCGGGAGATCGGCCAGGCGGTGGGTCTCTCCAGCACCTCGTCGGTCGCCCATCAGCTCATGGCGCTGGAGCG
CAAGGGCTTCCTCCGCCGCGACCCGCATCGCCCGCGGGCGTATGAGGTGCGCGGCTCGGACCAGCCCGCCACACAGGCGA
CGGACACGACGGGCAAGCCCGCGGCGTCGTATGTGCCCCTGGTCGGCCGTATCGCCGCCGGTGGCCCCATCCTCGCCGAG
GAGTCGGTCGAGGACGTCTTCCCCCTCCCCCGGCAGCTCGTCGGCGACGGCGAGCTGTTCGTGCTCAAGGTCGTCGGCGA
CTCGATGATCGAGGCCGCCATCTGCGACGGCGACTGGGTCACGGTCCGCCGTCAGCCGGTTGCGGAGAATGGTGACATCG
TCGCGGCGATGCTGGACGGAGAGGCCACGGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTTTGGCTGCTCCCGCACAAC
GCTGCCTATCAGCCGATCCCCGGTGACGAGGCAACGATCCTCGGCAAGGTGGTGGCAGTGCTTCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371