Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   OG766_RS10990 Genome accession   NZ_CP108080
Coordinates   2441881..2443806 (+) Length   641 a.a.
NCBI ID   WP_266374367.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2436881..2448806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG766_RS10975 (OG766_10975) - 2437837..2438139 (+) 303 WP_266374370.1 YtxH domain-containing protein -
  OG766_RS10980 (OG766_10980) - 2438562..2440001 (+) 1440 WP_266374369.1 FGGY family carbohydrate kinase -
  OG766_RS10985 (OG766_10985) rcrP 2440148..2441881 (+) 1734 WP_266374368.1 ABC transporter ATP-binding protein Regulator
  OG766_RS10990 (OG766_10990) rcrQ 2441881..2443806 (+) 1926 WP_266374367.1 ABC transporter ATP-binding protein Regulator
  OG766_RS10995 (OG766_10995) - 2443853..2445115 (-) 1263 WP_266374366.1 RNA polymerase sigma factor -
  OG766_RS11000 (OG766_11000) - 2445333..2446367 (+) 1035 WP_266374365.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  OG766_RS11005 (OG766_11005) dnaG 2446364..2448262 (-) 1899 WP_266374364.1 DNA primase -

Sequence

Protein


Download         Length: 641 a.a.        Molecular weight: 69139.61 Da        Isoelectric Point: 5.1212

>NTDB_id=652891 OG766_RS10990 WP_266374367.1 2441881..2443806(+) (rcrQ) [Streptomyces sp. NBC_00259]
MAGPGGRMMMGQSGERSMDFKGSGKRLLRQCAPDRRALWVMLVACVLSVGLSVVGPLILGKATDLVFAGVVGREMREGTT
KEQALDGLRAQGSDGLADMLSGVDFTPGRGIDFGAVGDILLVALVVFAASGLLMLVATRASIVVINRTMYRMREDIQDKL
SRLPLSYFDKAKRGEVLSRATNDIDNISQTMQQSMGQLLNSLLTIIGVLAMMFWISPLLALVALVTVPLSVVVAAKIGKR
SQPQFVQQWRSTGRLNAHIEEMYTGHALVKVFGRQDESAKEFAEQNDALYEAGFRAQFNSGVMQPLMFFVSNLNYVLVAV
VGGLRVASGTLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDADEQAPDPVVGARPGELRGAVALEK
VSFRYEPEKPLIEDLSLAVEPGHTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDAATMSREDLRSGIGMVLQDTW
LFGGTIAENIAYGTSRKVTREEIEEAARAAHADRFIRTLPDGYDTVIEDDGAGVSTGEKQLITIARAFLSDPVILVLDEA
TSSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHEELLLAGGAYARLYSAQFAQAVAEV
D

Nucleotide


Download         Length: 1926 bp        

>NTDB_id=652891 OG766_RS10990 WP_266374367.1 2441881..2443806(+) (rcrQ) [Streptomyces sp. NBC_00259]
ATGGCCGGTCCTGGTGGACGCATGATGATGGGCCAGTCCGGCGAGCGGTCCATGGACTTCAAGGGCTCGGGCAAGCGGCT
GCTGCGGCAGTGCGCCCCGGACCGGCGCGCCCTGTGGGTGATGCTGGTGGCCTGTGTGCTGAGCGTGGGTCTCTCGGTGG
TCGGGCCGCTGATCCTCGGCAAGGCGACCGACCTCGTCTTCGCGGGTGTCGTCGGCCGTGAGATGCGGGAGGGCACCACC
AAGGAGCAGGCCCTGGACGGCCTGCGGGCGCAGGGCAGCGACGGGCTCGCGGACATGCTGTCCGGGGTCGACTTCACCCC
GGGCCGGGGCATCGACTTCGGGGCGGTCGGCGACATCCTGCTGGTGGCGCTCGTCGTGTTCGCGGCTTCCGGGCTGCTGA
TGCTGGTGGCCACGCGGGCGTCGATCGTGGTCATCAACCGGACCATGTACCGGATGCGGGAGGACATCCAGGACAAGCTG
TCGCGGCTGCCGCTTTCGTACTTCGACAAGGCCAAGCGCGGTGAGGTGCTGAGCCGTGCCACGAACGACATCGACAACAT
CTCGCAGACCATGCAGCAGTCGATGGGTCAGCTGCTCAACTCCCTGCTGACGATCATCGGTGTGCTGGCGATGATGTTCT
GGATCTCGCCGCTGCTGGCGCTGGTCGCGCTCGTGACCGTGCCGCTGTCGGTGGTGGTGGCGGCGAAGATCGGCAAGCGT
TCGCAACCGCAGTTCGTGCAGCAGTGGAGGTCCACGGGCCGGCTCAACGCGCACATCGAGGAGATGTACACCGGCCATGC
GCTGGTGAAGGTCTTCGGCCGGCAGGACGAGTCGGCGAAGGAGTTCGCCGAGCAGAACGATGCGCTGTACGAGGCGGGGT
TCCGGGCGCAGTTCAACAGCGGCGTCATGCAGCCGCTGATGTTCTTCGTCTCGAACCTCAACTATGTGCTGGTGGCGGTC
GTCGGCGGGCTGCGGGTCGCCTCGGGCACGCTGTCGATCGGCGACGTGCAGGCGTTCATCCAGTACTCGCGGCAGTTCTC
GATGCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTGCAGTCCGGGGTCGCTTCGGCCGAGCGGATCTTCGAGCTGC
TGGACGCGGACGAGCAGGCGCCCGACCCGGTCGTCGGGGCGCGGCCCGGGGAGCTGCGGGGCGCGGTCGCGCTGGAGAAG
GTCTCGTTCCGCTACGAGCCGGAGAAGCCGCTCATCGAGGATCTGTCGCTGGCGGTCGAGCCGGGGCACACCGTCGCGAT
CGTCGGCCCGACCGGAGCCGGCAAGACCACGCTGGTGAATCTGCTGATGCGGTTCTACGAGGTCACCGGCGGCCGGATCA
CCCTCGACGGCGTCGACGCGGCCACGATGTCCCGGGAGGACCTGCGGTCCGGGATCGGGATGGTGCTGCAGGACACCTGG
CTGTTCGGCGGCACGATCGCGGAGAACATCGCGTACGGCACCTCGCGCAAGGTGACCCGGGAGGAGATCGAGGAGGCGGC
GCGGGCGGCCCACGCCGACCGCTTCATCCGGACCCTCCCGGACGGCTACGACACCGTCATCGAGGACGACGGCGCGGGCG
TCAGCACGGGCGAGAAGCAGCTGATCACCATCGCGCGGGCGTTCCTGTCCGACCCGGTGATCCTGGTTCTCGACGAGGCG
ACCAGCTCCGTCGACACCCGGACCGAGGTGCTGATCCAGAAGGCGATGGCGCGGCTCGCCCATGGGCGTACGAGCTTTGT
GATCGCCCACCGGCTCTCCACCATCAGGGACGCGGACGTGATCCTGGTGATGGAGAACGGCTCGATCGTCGAACAGGGCA
CGCACGAGGAGCTGTTGCTGGCGGGTGGCGCGTACGCGCGGCTGTACTCGGCACAGTTCGCGCAGGCGGTGGCGGAGGTC
GACTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(413-562)

ABC transporter transmembrane region (ABC_membrane)

(39-350)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.575

97.66

0.396