Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   OG766_RS10985 Genome accession   NZ_CP108080
Coordinates   2440148..2441881 (+) Length   577 a.a.
NCBI ID   WP_266374368.1    Uniprot ID   A0ACC6QFZ3
Organism   Streptomyces sp. NBC_00259     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2435148..2446881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG766_RS10955 (OG766_10955) - 2435929..2437071 (+) 1143 WP_328725177.1 hypothetical protein -
  OG766_RS10975 (OG766_10975) - 2437837..2438139 (+) 303 WP_266374370.1 YtxH domain-containing protein -
  OG766_RS10980 (OG766_10980) - 2438562..2440001 (+) 1440 WP_266374369.1 FGGY family carbohydrate kinase -
  OG766_RS10985 (OG766_10985) rcrP 2440148..2441881 (+) 1734 WP_266374368.1 ABC transporter ATP-binding protein Regulator
  OG766_RS10990 (OG766_10990) rcrQ 2441881..2443806 (+) 1926 WP_266374367.1 ABC transporter ATP-binding protein Regulator
  OG766_RS10995 (OG766_10995) - 2443853..2445115 (-) 1263 WP_266374366.1 RNA polymerase sigma factor -
  OG766_RS11000 (OG766_11000) - 2445333..2446367 (+) 1035 WP_266374365.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62195.14 Da        Isoelectric Point: 5.0325

>NTDB_id=652890 OG766_RS10985 WP_266374368.1 2440148..2441881(+) (rcrP) [Streptomyces sp. NBC_00259]
MLIRILRTFLRPYRQAITLLVALQLLQTSATLYLPTLNADIIDNGVVQGDTGYILSFGALMIGVSVVQVVCNIGAVYYGA
RTAAALGRDVRAAVFERVQSFSAREVGHFGAPSLITRTTNDVQQVQMLVLMGFTLMVSAPIMCVGGIVLALALDVPLSAV
LLAVVPVLGISVALIVTRMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVKDTYEADRFRGANAELTDVSLSTGRLMAL
MFPIVMTVVNVSSIAVVWFGAHRIDSGEMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLATGSSVVP
PLSPVHELARHGHLEVRGADFRYPGAEEPVLRAVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTGGEVLVDGVDVR
ELDPALMARTVGLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAADFVRDLEGGLDAPVAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRGALSLETAESTVVIVAQRVSTIRDADRIVVLDEGRVVGTGGHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=652890 OG766_RS10985 WP_266374368.1 2440148..2441881(+) (rcrP) [Streptomyces sp. NBC_00259]
GTGCTCATACGAATCCTCCGGACGTTCCTGCGTCCTTACCGACAAGCGATCACCCTCCTGGTGGCGCTGCAACTGCTGCA
GACCAGCGCGACCCTCTATCTGCCCACGCTGAACGCCGACATCATCGACAACGGTGTCGTGCAGGGTGACACCGGCTACA
TCCTGAGCTTCGGCGCCCTGATGATCGGCGTCAGCGTGGTCCAGGTGGTGTGCAACATCGGCGCCGTGTACTACGGCGCG
AGGACCGCCGCCGCGCTCGGCCGGGACGTGCGGGCCGCCGTCTTCGAGCGGGTGCAGTCGTTCTCGGCCCGTGAGGTCGG
GCACTTCGGTGCCCCGTCGCTCATCACCCGGACGACCAATGACGTCCAACAGGTCCAGATGCTGGTGCTGATGGGCTTCA
CGCTGATGGTGTCCGCGCCGATCATGTGCGTCGGCGGCATCGTCCTGGCGCTGGCCCTGGACGTTCCGCTGTCGGCGGTG
CTGCTCGCGGTCGTGCCGGTGCTGGGCATCTCCGTGGCACTGATCGTGACGAGGATGCGGCCGCTGTTCCGCACCATGCA
GGAGCGCCTCGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGTAACCGGGTGATCAGGGCCTTCGTGAAGGACA
CCTACGAGGCGGACCGCTTCCGCGGCGCGAACGCCGAGCTGACGGACGTGTCGCTGTCGACCGGCCGTCTCATGGCGCTG
ATGTTCCCGATCGTCATGACCGTCGTGAACGTGTCGAGCATCGCCGTCGTCTGGTTCGGCGCCCACCGCATCGACAGCGG
CGAGATGCAGATCGGCGCGCTCACCGCCTTCCTCGCCTATCTGATGCAGATCGTCATGGCCGTCATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGGGCCGAGGTCTGTGCCGAGCGCATCGAGGAGGTCCTGGCGACCGGTTCGAGCGTCGTCCCG
CCGCTCTCCCCGGTGCACGAGCTGGCGCGCCACGGCCATCTGGAGGTCCGCGGCGCCGACTTCCGCTACCCGGGCGCCGA
GGAGCCCGTGCTGCGCGCGGTGGATCTGGTCGCCAGGCCCGGTGAGACGACCGCGATCATCGGCTCGACGGGCAGCGGAA
AGTCGACCCTGCTCGGGCTGGTCCCGCGGCTGTTCGACGTCACCGGCGGCGAGGTCCTCGTTGACGGCGTGGACGTACGG
GAGCTGGATCCGGCGCTGATGGCCCGGACGGTCGGGCTCGTACCGCAGAAGCCGTACCTCTTCTCCGGCACGGTCGCGAC
GAACCTGCGCTACGGCAATCCGGACGCGACCGACGAGGAGCTGTGGCACGCGCTCGAGGTCGCCCAGGCGGCCGACTTCG
TACGCGATCTGGAAGGCGGGCTGGACGCGCCGGTCGCGCAGGGCGGCACGAACGTGTCCGGCGGTCAGCGGCAGCGGCTC
GCCATCGCGCGGACGCTGGTGCAGCGGCCCGAGATCTATCTCTTCGACGACTCCTTCTCGGCCCTGGACTACGCGACGGA
CGCGGCGCTGCGCGGTGCGCTGTCGCTGGAGACCGCCGAGTCGACCGTCGTGATCGTCGCACAGCGGGTGTCGACCATCC
GTGACGCCGACCGGATCGTGGTCCTCGACGAGGGCCGGGTCGTGGGCACGGGCGGCCATCACGAGCTGATGGCGGGCAAT
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACCGAGGCGGAGGCTGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(352-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.28

98.96

0.399