Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BEST7003_RS22120 Genome accession   NZ_AP012496
Coordinates   390876..391016 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis BEST7003     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 385876..396016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEST7003_RS22115 srfAB 387809..390784 (+) 2976 Protein_353 surfactin non-ribosomal peptide synthetase SrfAB -
  BEST7003_RS22120 comS 390876..391016 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=65288 BEST7003_RS22120 WP_010886404.1 390876..391016(+) (comS) [Bacillus subtilis BEST7003]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=65288 BEST7003_RS22120 WP_010886404.1 390876..391016(+) (comS) [Bacillus subtilis BEST7003]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment