Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG798_RS37760 Genome accession   NZ_CP108070
Coordinates   8329280..8330056 (-) Length   258 a.a.
NCBI ID   WP_054229877.1    Uniprot ID   A0A250VHF9
Organism   Streptomyces sp. NBC_00271     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8324280..8335056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG798_RS37750 (OG798_37825) - 8324292..8326358 (+) 2067 WP_267062997.1 IucA/IucC family siderophore biosynthesis protein -
  OG798_RS37755 (OG798_37830) - 8326453..8328456 (+) 2004 WP_095852223.1 ATP-dependent DNA helicase -
  OG798_RS37760 (OG798_37835) dinR/lexA 8329280..8330056 (-) 777 WP_054229877.1 transcriptional repressor LexA Regulator
  OG798_RS37765 (OG798_37840) nrdR 8330574..8331158 (+) 585 WP_095852222.1 transcriptional regulator NrdR -
  OG798_RS37770 (OG798_37845) - 8331311..8334208 (+) 2898 WP_097224592.1 vitamin B12-dependent ribonucleotide reductase -
  OG798_RS37775 (OG798_37850) - 8334335..8334868 (-) 534 WP_097224591.1 TerD family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27935.63 Da        Isoelectric Point: 7.4755

>NTDB_id=652683 OG798_RS37760 WP_054229877.1 8329280..8330056(-) (dinR/lexA) [Streptomyces sp. NBC_00271]
MTTTADSATITAQDRSQGRLEPVHAMNEATNHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=652683 OG798_RS37760 WP_054229877.1 8329280..8330056(-) (dinR/lexA) [Streptomyces sp. NBC_00271]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCACGAATCATGAGGGGCCCAAGCGCTCCCTGCCAGGGCGACCTCCAGGCATCCGCGCCGACAGCTCGGGACTCA
CCGACAGGCAGCGCCGGGTGATCGAGGTCATCCGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGACAGGCGGTCGGCCTTTCCAGCACCTCGTCGGTCGCCCACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGATCCGCACCGGCCGCGAGCGTACGAGGTCCGGGGCTCCGACCAGTCCTCGGCACAGCCCACCGACACGGCGGGCAAGC
CGGCCGCGTCGTACGTGCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTGGCCGAGGAGTCGGTGGAGGATGTC
TTCCCCCTCCCCCGGCAGTTGGTCGGTGACGGCGAGCTGTTCGTCCTGAAGGTCGTGGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGACGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCGATGCTGGACG
GCGAGGCCACGGTGAAGCGGTTCAAGCGCGAGGACGGCCATGTGTGGCTCCTCCCGCACAACGCCGCGTACCAGCCGATT
CCCGGCGACGAGGCGACCATCCTGGGCAAGGTGGTGGCGGTGCTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A250VHF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372