Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG827_RS21590 Genome accession   NZ_CP108068
Coordinates   4587731..4588855 (-) Length   374 a.a.
NCBI ID   WP_327284710.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00272     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4582731..4593855
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG827_RS21560 (OG827_21565) cseB 4582923..4583636 (-) 714 WP_327284707.1 two-component system response regulator CseB -
  OG827_RS21565 (OG827_21570) - 4583667..4584305 (-) 639 WP_327285734.1 hypothetical protein -
  OG827_RS21570 (OG827_21575) - 4584344..4584916 (-) 573 WP_030867865.1 SigE family RNA polymerase sigma factor -
  OG827_RS21575 (OG827_21580) - 4585091..4586056 (-) 966 WP_327284708.1 A/G-specific adenine glycosylase -
  OG827_RS21580 (OG827_21585) - 4586080..4586694 (-) 615 WP_327284709.1 phosphatase PAP2 family protein -
  OG827_RS21585 (OG827_21590) - 4586864..4587667 (+) 804 WP_327285735.1 hypothetical protein -
  OG827_RS21590 (OG827_21595) disA 4587731..4588855 (-) 1125 WP_327284710.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG827_RS21595 (OG827_21600) radA/sms 4589067..4590470 (-) 1404 WP_327284711.1 DNA repair protein RadA Machinery gene
  OG827_RS21600 (OG827_21605) - 4590668..4592443 (+) 1776 WP_328763336.1 hypothetical protein -
  OG827_RS21605 (OG827_21610) - 4592469..4593302 (-) 834 WP_327284713.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40348.33 Da        Isoelectric Point: 5.0260

>NTDB_id=652573 OG827_RS21590 WP_327284710.1 4587731..4588855(-) (disA) [Streptomyces sp. NBC_00272]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652573 OG827_RS21590 WP_327284710.1 4587731..4588855(-) (disA) [Streptomyces sp. NBC_00272]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGCGACGGCCTGGAACGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTGC
TCGGGATGGACAAGTCCGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGCCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCCGGGACGCTGTC
CGCGTTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTAGCCCAGCGGCTGGAAATGGTCCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACCGCGAAGCGCTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCACCCGGAGCTGCTGGAGCTCGGCATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCCGAGACCCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGTGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTGCAGACCGTGGA
CGGCGTGGGCGAGGCGCGGGCGCGGAGCGTCCGCGAGGGCCTGTCGCGCCTGGCGGAGTCCTCGATCCTCGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441