Detailed information NTG0065256

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R15_RS22395
• Genome accession: NZ_AP022032
• Coordinates: 4660404..4661429 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP3-S18-ESBL-08
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4655404..4666429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R15_RS22375 (WP3S18E08_43350)	metJ	4656589..4656906 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R15_RS22380 (WP3S18E08_43360)	yiiX	4656966..4657574 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
H7R15_RS22385 (WP3S18E08_43370)	rpmE	4657635..4657847 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R15_RS22390 (WP3S18E08_43380)	priA	4658050..4660248 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
H7R15_RS22395 (WP3S18E08_43390)	cytR	4660404..4661429 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7R15_RS22400 (WP3S18E08_43400)	ftsN	4661521..4662480 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7R15_RS22405 (WP3S18E08_43410)	hslV	4662573..4663103 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R15_RS22410 (WP3S18E08_43420)	hslU	4663113..4664444 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R15_RS22415 (WP3S18E08_43430)	menA	4664511..4665437 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R15_RS22420 (WP3S18E08_43440)	rraA	4665530..4666015 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7R15_RS22425 (WP3S18E08_43450)	zapB	4666100..4666345 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=65256 H7R15_RS22395 WP_000644908.1 4660404..4661429(+) (cytR) [Escherichia coli strain WP3-S18-ESBL-08]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65256 H7R15_RS22395 WP_000644908.1 4660404..4661429(+) (cytR) [Escherichia coli strain WP3-S18-ESBL-08]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625