Detailed information NTG0652495

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG386_RS27535
• Genome accession: NZ_CP108067
• Coordinates: 6217318..6218343 (+)
• Length: 341 a.a.
• NCBI ID: WP_328790333.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00273
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 6212318..6223343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG386_RS27515 (OG386_27525)	-	6212585..6214039 (-)	1455	WP_328790329.1	GH1 family beta-glucosidase	-
OG386_RS27520 (OG386_27530)	-	6214036..6214860 (-)	825	WP_328790330.1	carbohydrate ABC transporter permease	-
OG386_RS27525 (OG386_27535)	-	6214857..6215852 (-)	996	WP_328790331.1	sugar ABC transporter permease	-
OG386_RS27530 (OG386_27540)	-	6215860..6217215 (-)	1356	WP_328790332.1	extracellular solute-binding protein	-
OG386_RS27535 (OG386_27545)	cytR	6217318..6218343 (+)	1026	WP_328790333.1	LacI family DNA-binding transcriptional regulator	Regulator
OG386_RS27545 (OG386_27555)	orn	6218595..6219197 (-)	603	WP_030008729.1	oligoribonuclease	-
OG386_RS27550 (OG386_27560)	-	6219303..6220478 (-)	1176	WP_150257537.1	helix-turn-helix domain-containing protein	-
OG386_RS27555 (OG386_27565)	-	6220855..6221175 (-)	321	WP_328793379.1	hypothetical protein	-
OG386_RS27560 (OG386_27570)	-	6221621..6222154 (+)	534	WP_266596220.1	universal stress protein	-
OG386_RS27565 (OG386_27575)	-	6222311..6222880 (+)	570	WP_030008733.1	GPR1/FUN34/YaaH family transporter	-
OG386_RS27570 (OG386_27580)	-	6222954..6223334 (-)	381	WP_328790335.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 36192.14 Da
• Isoelectric Point: 7.1361

>NTDB_id=652495 OG386_RS27535 WP_328790333.1 6217318..6218343(+) (cytR) [Streptomyces sp. NBC_00273]
MNGHGRSGGRPTLEEVAARAGVGRGTVSRVINGSSKVSEHTRVAVEAAVAELGYVPNRAARALAANRTDAIALVIPEPEA
RFFAEPYFSEVVRGVGAELADTEVQLVLTLAGSDRERRRLAQYLSGHRVDGVLLVSVHAGDPLPELLAELGIPTVISGRR
SAAETLPSVDSDNLAGAAEAVSHLLDRGRRAIATITGPLDVYGAQCRLDGYRKALAAAGRPVDERMIAVGDFTEEGGRRA
MRALLERHPGLDAVFAASDVMAAGARRELRAAGRRIPRDVALVGFDDSVVARHMDPPLTSVRQPIEEMGRTMTRMLLDRI
AGEGGEAAAVLPNRLVVRESS

Nucleotide

• Length: 1026 bp

>NTDB_id=652495 OG386_RS27535 WP_328790333.1 6217318..6218343(+) (cytR) [Streptomyces sp. NBC_00273]
ATGAACGGGCACGGGCGCAGTGGGGGACGACCGACCCTGGAGGAGGTCGCGGCGCGCGCCGGAGTCGGGCGCGGCACGGT
CTCCCGGGTGATCAACGGATCCTCCAAGGTCAGCGAGCACACCAGGGTCGCCGTCGAGGCGGCCGTGGCCGAGCTGGGGT
ACGTACCGAACCGTGCCGCGCGCGCCCTCGCGGCCAACCGCACCGACGCCATAGCCCTCGTGATCCCCGAGCCCGAGGCC
CGCTTCTTCGCCGAGCCCTACTTCTCCGAAGTGGTCCGCGGTGTCGGCGCCGAGCTCGCCGACACCGAGGTCCAGCTCGT
CCTCACCCTGGCGGGCAGCGACCGCGAGCGCCGCCGGCTCGCGCAGTACCTGTCCGGGCACCGCGTCGACGGGGTGCTGC
TCGTCTCCGTCCACGCCGGGGACCCGCTGCCGGAGCTGCTGGCCGAACTCGGCATCCCGACGGTGATCAGCGGCCGCCGC
TCGGCCGCCGAGACCCTGCCCAGCGTGGACTCCGACAACCTGGCGGGCGCGGCCGAGGCCGTGAGCCACCTCCTCGACCG
GGGCCGCCGCGCGATCGCCACGATCACCGGCCCGCTGGACGTGTACGGGGCCCAGTGCCGCCTCGACGGTTACCGGAAGG
CCCTGGCCGCCGCCGGACGCCCCGTCGACGAGCGGATGATCGCGGTCGGTGACTTCACCGAGGAGGGCGGCCGGCGGGCC
ATGCGCGCACTGCTGGAGCGCCACCCCGGGCTCGACGCGGTCTTCGCCGCCTCGGACGTGATGGCGGCGGGCGCCCGGCG
GGAGCTGCGCGCGGCCGGCCGGCGGATCCCGCGGGACGTGGCGCTGGTCGGCTTCGACGACTCGGTGGTGGCCCGGCACA
TGGACCCGCCGCTGACCAGCGTCCGGCAGCCGATCGAGGAGATGGGCCGGACCATGACGCGGATGCTGCTGGACCGGATC
GCGGGGGAGGGGGGCGAGGCGGCCGCCGTGCTGCCGAACCGGCTGGTGGTCCGGGAGTCGTCCTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (12-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	37.87	99.12	0.375
cytR	Vibrio parahaemolyticus RIMD 2210633	36.686	99.12	0.364