Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LVJ77_RS02265 Genome accession   NZ_CP091521
Coordinates   468909..469361 (-) Length   150 a.a.
NCBI ID   WP_034334357.1    Uniprot ID   -
Organism   Conchiformibius kuhniae strain 17694     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 463909..474361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ77_RS02250 (LVJ77_01135) - 464052..465461 (-) 1410 WP_034334288.1 MFS transporter -
  LVJ77_RS02255 (LVJ77_01125) argG 465546..466874 (-) 1329 WP_027009090.1 argininosuccinate synthase -
  LVJ77_RS02260 (LVJ77_01120) - 466943..468397 (-) 1455 WP_027009089.1 TrkH family potassium uptake protein -
  LVJ77_RS02265 (LVJ77_01115) recX 468909..469361 (-) 453 WP_034334357.1 recombination regulator RecX Regulator
  LVJ77_RS02270 (LVJ77_01110) - 469358..470071 (-) 714 WP_027009087.1 phosphoglycolate phosphatase -
  LVJ77_RS02275 (LVJ77_01105) - 470058..470240 (+) 183 WP_211224343.1 hypothetical protein -
  LVJ77_RS02280 (LVJ77_01095) - 470390..470728 (+) 339 WP_281168317.1 type II toxin-antitoxin system RelE/ParE family toxin -
  LVJ77_RS02285 (LVJ77_01090) - 470745..471053 (+) 309 WP_245571912.1 HigA family addiction module antitoxin -
  LVJ77_RS02290 (LVJ77_12135) glpQ 471088..472197 (+) 1110 WP_027009084.1 glycerophosphodiester phosphodiesterase -
  LVJ77_RS02295 (LVJ77_01070) - 472444..473418 (-) 975 WP_027009083.1 SIS domain-containing protein -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 16682.95 Da        Isoelectric Point: 10.7643

>NTDB_id=652030 LVJ77_RS02265 WP_034334357.1 468909..469361(-) (recX) [Conchiformibius kuhniae strain 17694]
MNTPSLKARALAILARREAGREELRRKLAPHAADAAELDTLLDELAAQGWQSDRRFAEMWVNGKSRKHGRLRLQQDLAAR
GVARETAAAFLPDAEAELANAVAVLRKKFKTAPADAAERAKQMRFLAYRGFAADTVQRALRQAWTDTESD

Nucleotide


Download         Length: 453 bp        

>NTDB_id=652030 LVJ77_RS02265 WP_034334357.1 468909..469361(-) (recX) [Conchiformibius kuhniae strain 17694]
GTGAACACGCCGAGTTTGAAAGCCCGCGCCTTGGCGATTTTGGCGCGGCGCGAAGCGGGACGCGAAGAGTTGCGCCGCAA
ACTCGCGCCGCACGCCGCCGATGCCGCCGAATTGGACACATTATTGGACGAACTGGCCGCGCAAGGTTGGCAGTCCGACC
GCCGTTTTGCCGAAATGTGGGTGAACGGCAAATCGCGCAAACACGGGCGTTTGCGTTTGCAACAGGATTTGGCGGCGCGG
GGCGTGGCGCGGGAAACGGCGGCGGCGTTCCTGCCCGATGCGGAAGCGGAATTGGCGAACGCGGTGGCGGTGTTGCGTAA
AAAATTCAAAACCGCGCCCGCAGACGCGGCGGAACGCGCCAAGCAGATGCGGTTTTTGGCGTATCGCGGTTTTGCGGCGG
ATACGGTGCAACGCGCCCTGCGCCAAGCGTGGACGGACACGGAATCTGACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

54.11

97.333

0.527