Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SPYJRS4_RS08520 Genome accession   NZ_AP012335
Coordinates   1726346..1727059 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes JRS4     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1721346..1732059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYJRS4_RS08510 (SPYJRS4_1803) treC 1722416..1724044 (-) 1629 WP_011185052.1 alpha,alpha-phosphotrehalase -
  SPYJRS4_RS08515 (SPYJRS4_1804) treP 1724111..1726135 (-) 2025 WP_011185053.1 PTS system trehalose-specific EIIBC component -
  SPYJRS4_RS08520 (SPYJRS4_1805) treR 1726346..1727059 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  SPYJRS4_RS08525 (SPYJRS4_1808) - 1727338..1727664 (-) 327 WP_011185054.1 helix-turn-helix domain-containing protein -
  SPYJRS4_RS08530 (SPYJRS4_1809) - 1727850..1728698 (+) 849 Protein_1650 VOC family protein -
  SPYJRS4_RS08535 (SPYJRS4_1810) yaaA 1728740..1729471 (+) 732 WP_047149521.1 peroxide stress protein YaaA -
  SPYJRS4_RS08540 (SPYJRS4_1811) nrdG 1729645..1730259 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  SPYJRS4_RS08545 (SPYJRS4_1812) - 1730259..1730768 (-) 510 WP_011185058.1 GNAT family N-acetyltransferase -
  SPYJRS4_RS08550 (SPYJRS4_1813) - 1730777..1731712 (-) 936 WP_002992828.1 Gfo/Idh/MocA family oxidoreductase -
  SPYJRS4_RS09535 (SPYJRS4_1814) - 1731741..1731887 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=65203 SPYJRS4_RS08520 WP_002982243.1 1726346..1727059(+) (treR) [Streptococcus pyogenes JRS4]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=65203 SPYJRS4_RS08520 WP_002982243.1 1726346..1727059(+) (treR) [Streptococcus pyogenes JRS4]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment