Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SPYJRS4_RS06840 Genome accession   NZ_AP012335
Coordinates   1367405..1368130 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes JRS4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1362405..1373130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYJRS4_RS06805 (SPYJRS4_1436) - 1362434..1362730 (-) 297 WP_002983486.1 YlxR family protein -
  SPYJRS4_RS06810 (SPYJRS4_1437) nusA 1362746..1363903 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  SPYJRS4_RS06815 (SPYJRS4_1438) rimP 1364078..1364614 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  SPYJRS4_RS06825 (SPYJRS4_1439) trmB 1364878..1365513 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYJRS4_RS06830 (SPYJRS4_1440) - 1365513..1366304 (-) 792 WP_002983385.1 phosphotransferase family protein -
  SPYJRS4_RS06835 (SPYJRS4_1441) - 1366368..1367402 (-) 1035 WP_002983381.1 ABC transporter permease -
  SPYJRS4_RS06840 (SPYJRS4_1442) pptA 1367405..1368130 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYJRS4_RS06845 (SPYJRS4_1443) - 1368202..1368621 (+) 420 WP_002983376.1 HIT family protein -
  SPYJRS4_RS06850 (SPYJRS4_1444) - 1368618..1368974 (+) 357 WP_002988657.1 hypothetical protein -
  SPYJRS4_RS06855 (SPYJRS4_1445) - 1369085..1370368 (-) 1284 WP_011184864.1 LCP family protein -
  SPYJRS4_RS06860 (SPYJRS4_1446) - 1370377..1370901 (-) 525 WP_011184865.1 N-acetyltransferase -
  SPYJRS4_RS06865 (SPYJRS4_1447) tsaE 1370876..1371337 (-) 462 WP_011184866.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYJRS4_RS06870 (SPYJRS4_1448) - 1371491..1372951 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=65196 SPYJRS4_RS06840 WP_002983379.1 1367405..1368130(-) (pptA) [Streptococcus pyogenes JRS4]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=65196 SPYJRS4_RS06840 WP_002983379.1 1367405..1368130(-) (pptA) [Streptococcus pyogenes JRS4]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCTTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment