Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LVJ84_RS02835 Genome accession   NZ_CP091516
Coordinates   466699..467151 (-) Length   150 a.a.
NCBI ID   WP_244733290.1    Uniprot ID   -
Organism   Kingella potus strain 3/SID/1128     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 461699..472151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ84_RS02805 (LVJ84_02805) - 461848..462597 (+) 750 WP_115308156.1 GNAT family N-acyltransferase -
  LVJ84_RS02810 (LVJ84_02810) - 462677..463423 (+) 747 WP_115308157.1 lysophospholipid acyltransferase family protein -
  LVJ84_RS02815 (LVJ84_02815) - 463505..464935 (+) 1431 WP_115308158.1 MFS transporter -
  LVJ84_RS02820 (LVJ84_02820) - 464974..465162 (-) 189 WP_244732282.1 hypothetical protein -
  LVJ84_RS02825 (LVJ84_02825) - 465207..465497 (-) 291 WP_244732283.1 hypothetical protein -
  LVJ84_RS02830 (LVJ84_02830) - 465592..466412 (-) 821 Protein_561 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  LVJ84_RS02835 (LVJ84_02835) recX 466699..467151 (-) 453 WP_244733290.1 recombination regulator RecX Regulator
  LVJ84_RS02840 (LVJ84_02840) - 467216..467932 (-) 717 WP_115308325.1 phosphoglycolate phosphatase -
  LVJ84_RS02845 (LVJ84_02845) - 468195..468899 (-) 705 WP_244733292.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  LVJ84_RS02850 (LVJ84_02850) - 468896..469375 (-) 480 WP_342345871.1 S-ribosylhomocysteine lyase -
  LVJ84_RS02855 (LVJ84_02855) - 469482..470009 (-) 528 WP_115308161.1 cytochrome b -
  LVJ84_RS02860 (LVJ84_02860) purN 470229..470858 (-) 630 WP_115308162.1 phosphoribosylglycinamide formyltransferase -
  LVJ84_RS14760 - 471106..471234 (-) 129 WP_280529851.1 hypothetical protein -
  LVJ84_RS02865 (LVJ84_02865) - 471385..471558 (-) 174 WP_244732285.1 hypothetical protein -
  LVJ84_RS02870 (LVJ84_02870) - 471639..471938 (-) 300 Protein_570 3'-5' exonuclease -
  LVJ84_RS02875 (LVJ84_02875) - 471819..472112 (+) 294 WP_244732287.1 hypothetical protein -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 16798.66 Da        Isoelectric Point: 5.8430

>NTDB_id=651954 LVJ84_RS02835 WP_244733290.1 466699..467151(-) (recX) [Kingella potus strain 3/SID/1128]
MLARSETGRAALKRKLAPHAESEDELEAVLDEMAARGWQSDARYAEAYIRSKSPKHGTLRLRRDLAQQGVDSDTVRALLP
DDADETANAAAVLRKKFKVPPANYAEKQKQMRFLAYRGFDGGTIARALKQTWAEQSGGWDEEWNDGEYGD

Nucleotide


Download         Length: 453 bp        

>NTDB_id=651954 LVJ84_RS02835 WP_244733290.1 466699..467151(-) (recX) [Kingella potus strain 3/SID/1128]
ATCCTGGCCCGCAGCGAAACCGGCCGTGCCGCCCTCAAACGCAAACTCGCCCCCCACGCCGAAAGCGAAGACGAACTCGA
AGCCGTACTCGACGAAATGGCCGCCCGCGGCTGGCAGTCCGACGCACGCTACGCCGAAGCATACATCCGCAGCAAAAGCC
CCAAACACGGCACCCTGCGCCTGCGCCGCGACCTCGCACAGCAAGGCGTGGACAGCGACACCGTCCGCGCCCTCCTCCCC
GATGACGCAGACGAAACCGCCAACGCCGCCGCCGTCCTGCGCAAAAAATTCAAAGTCCCGCCCGCCAACTACGCCGAAAA
ACAAAAGCAAATGCGCTTTCTCGCCTACCGCGGCTTCGACGGCGGCACCATCGCCCGCGCCCTCAAACAAACCTGGGCGG
AACAAAGCGGCGGATGGGACGAAGAATGGAACGACGGCGAATACGGCGACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(17-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

63.699

97.333

0.62